RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ZNF605Q86T29 641 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 LPCAT1Q8NF37 534 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ZNF671Q8TAW3 534 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 POMKQ9H5K3 350 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 LNPEPQ9UIQ6 1025 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ARHGEF40Q8TER5 1519 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 TPBGLP0DKB5 382 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 ITGALP20701 1170 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 PKNOX1P55347 436 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 ANTXR2P58335 489 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 RHOAP61586 193 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 TCP10LQ8TDR4 215 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 PRR36Q9H6K5 1346 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 RIPK2O43353 540 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 VAV1P15498 845 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SPANXN2Q5MJ10 180 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SLC22A9Q8IVM8 553 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 ZNF222Q9UK12 451 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 A8MX80 341 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SLCO1B7G3V0H7 640 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 VCLP18206 1134 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 PTSQ03393 145 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 FRMD8P1Q9BZ68 369 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 STN1Q9H668 368 aaKnown RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 FCHO1O14526 889 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 HLA-DQA2P01906 255 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 PPP2R1BP30154 601 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 BHLHE22Q8NFJ8 381 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 USP7Q93009 1102 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 NRDE2Q9H7Z3 1164 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SIK3Q9Y2K2 1263 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 BTN3A3O00478 584 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 CNTFP26441 200 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SCNN1BP51168 640 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 C16orf86Q6ZW13 317 aa16.41■□□□□ 0.22
COL18A1-203ENST00000359759 TRMT11Q7Z4G4 463 aaKnown RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
COL18A1-203ENST00000359759 MROH7Q68CQ1 1323 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 HBP1O60381 514 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 LDLRP01130 860 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 RHOCP08134 193 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 GARTP22102 1010 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 RBBP4Q09028 425 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 RD3Q7Z3Z2 195 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 NEO1Q92859 1461 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 IDH3BO43837 385 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 RRM1P23921 792 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 MGAT1P26572 445 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 PNPLA4P41247 253 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 NPY2RP49146 381 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 GRB10Q13322 594 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 KIAA0408Q6ZU52 694 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 TINF2Q9BSI4 451 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SLITRK2Q9H156 845 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 LYVE1Q9Y5Y7 322 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 NRKQ7Z2Y5 1582 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SLC12A8A0AV02 714 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 MED24O75448 989 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SLC2A3P11169 496 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SKIV2L2P42285 1042 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 CBWD3Q5JTY5 395 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 CBWD5Q5RIA9 395 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 WASHC2DQ5SRD0 308 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 TBC1D16Q8TBP0 767 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 CDRT15Q96T59 188 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 ATAD3AQ9NVI7 634 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 DRG1Q9Y295 367 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 C17orf102A2RUQ5 167 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 MSH4O15457 936 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 TEX28O15482 410 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 PABPC1P11940 636 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 OSCP1Q8WVF1 389 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 MAP10Q9P2G4 905 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 SH3GLB1Q9Y371 365 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 FDPSP14324 419 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 LSM3P62310 102 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 NDUFAF6Q330K2 333 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 RNF44Q7L0R7 432 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
COL18A1-203ENST00000359759 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
COL18A1-203ENST00000359759 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.22
COL18A1-203ENST00000359759 PLK1P53350 603 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 KLHL12Q53G59 568 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 LRRC49Q8IUZ0 686 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ACTRT1Q8TDG2 376 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 SPON1Q9HCB6 807 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms