RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 ATP5OP48047 213 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 CCT5P48643 541 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ZNF33AQ06730 810 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 GPS1Q13098 491 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 CBLBQ13191 982 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.211e-7■■□□□ 12.9
NFIX-201ENST00000358552 PDK1Q15118 436 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 SPOUT1Q5T280 376 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 BHLHA9Q7RTU4 235 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ZCCHC9Q8N567 271 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 CCDC185Q8N715 623 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 KCTD15Q96SI1 283 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 CCDC77Q9BR77 488 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 NEUROG2Q9H2A3 272 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 CWH43Q9H720 699 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PPCSQ9HAB8 311 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
NFIX-201ENST00000358552 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 TMEM30AQ9NV96 361 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 FNIP2Q9P278 1114 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 F8W810 466 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
NFIX-201ENST00000358552 IFNB1P01574 187 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 LSP1P33241 339 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 PPP3CCP48454 512 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 NRG1Q02297 640 aaPredicted RBP13.75□□□□□ -0.21
NFIX-201ENST00000358552 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 EIF4EBP2Q13542 120 aaPredicted RBP13.75□□□□□ -0.21
NFIX-201ENST00000358552 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 TCTN1Q2MV58 587 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 SLC45A4Q5BKX6 768 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 MSANTD2Q6P1R3 559 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
NFIX-201ENST00000358552 HFE2Q6ZVN8 426 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 LZTR1Q8N653 840 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 RNF34Q969K3 372 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 C1orf74Q96LT6 269 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 TMEM109Q9BVC6 243 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 RETREG1Q9H6L5 497 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 ARHGEF38Q9NXL2 777 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 AFF4Q9UHB7 1163 aaKnown RBP13.75□□□□□ -0.21
NFIX-201ENST00000358552 FAM169AQ9Y6X4 670 aa13.75□□□□□ -0.21
NFIX-201ENST00000358552 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 IRAK2O43187 625 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 UPP2O95045 317 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 CSF2RAP15509 400 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 IFFO1Q0D2I5 559 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
NFIX-201ENST00000358552 OTUD1Q5VV17 481 aaPredicted RBP13.74□□□□□ -0.21
NFIX-201ENST00000358552 RFX8Q6ZV50 586 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 LRRC49Q8IUZ0 686 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 DQX1Q8TE96 717 aaKnown RBP13.74□□□□□ -0.21
NFIX-201ENST00000358552 NDRG1Q92597 394 aaKnown RBP13.74□□□□□ -0.21
NFIX-201ENST00000358552 HTATIP2Q9BUP3 242 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 KLC2Q9H0B6 622 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 SPG21Q9NZD8 308 aa13.74□□□□□ -0.21
NFIX-201ENST00000358552 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 CHADO15335 359 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 FGF10O15520 208 aaPredicted RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 GCATO75600 419 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 FAM107AO95990 144 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 TSHRP16473 764 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 TPI1P60174 286 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 DSG1Q02413 1049 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 PSMD5Q16401 504 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 CA9Q16790 459 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 HEATR6Q6AI08 1181 aaKnown RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 CENPUQ71F23 418 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 TAX1BP1Q86VP1 789 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 SCAMP5Q8TAC9 235 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 ZNF461Q8TAF7 563 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 CATSPERBQ9H7T0 1116 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 OR12D3Q9UGF7 316 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
NFIX-201ENST00000358552 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
NFIX-201ENST00000358552 NLRC5Q86WI3 1866 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms