RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZNF518BQ9C0D4 1074 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PRELID1Q9Y255 219 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 BTNL10A8MVZ5 291 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 TRDMT1O14717 391 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MTRF1O75570 445 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MLNP12872 115 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 IL12AP29459 219 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 CRKP46108 304 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PCSK7Q16549 785 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SGO1Q5FBB7 561 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 TAF5Q15542 800 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SLC15A2Q16348 729 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 DPP9Q86TI2 863 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 FIG4Q92562 907 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 AP3S1Q92572 193 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PLA2G12BQ9BX93 195 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MOV10Q9HCE1 1003 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ACOT9Q9Y305 439 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 HSD3B2P26439 372 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ELK3P41970 407 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 AMPD2Q01433 879 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 TYSND1Q2T9J0 566 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF284Q2VY69 593 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 KRT74Q7RTS7 529 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ACTL9Q8TC94 416 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MRPL48Q96GC5 212 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 DCUN1D1Q96GG9 259 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 TBX20Q9UMR3 447 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SALL1Q9NSC2 1324 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PROSCO94903 275 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 IFNA14P01570 189 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 NPR3P17342 541 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 PPP3CCP48454 512 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 RBP5P82980 135 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MGAT5Q09328 741 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MPP3Q13368 585 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 GRTP1Q5TC63 336 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 KIAA1841Q6NSI8 718 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 POLR1BQ9H9Y6 1135 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 FAM49BQ9NUQ9 324 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 AAR2Q9Y312 384 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 GAS2O43903 313 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ALOX15P16050 662 aaPredicted RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 WARSP23381 471 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 NR2C2P49116 596 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 TTC23LQ6PF05 361 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 DPP10Q8N608 796 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SPATA16Q9BXB7 569 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 CHST12Q9NRB3 414 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 CLCA2Q9UQC9 943 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 AKT1P31749 480 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MAPK10P53779 464 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PRKCQQ04759 706 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PDPRQ8NCN5 879 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ITFG1Q8TB96 612 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CCDC167Q9P0B6 97 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MAGEB16A2A368 324 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SLC16A1P53985 500 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 TUBA3CQ13748 450 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 DCAF6Q58WW2 860 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CYP4Z1Q86W10 505 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 RAB42Q8N4Z0 105 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 UTP15Q8TED0 518 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 OSBPL6Q9BZF3 934 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 VAV3Q9UKW4 847 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SPEF2Q9C093 1822 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 C1QBPQ07021 282 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GPR107Q5VW38 600 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MAGEE2Q8TD90 523 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ACSF2Q96CM8 615 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZHX1-C8orf76Q96EF9 292 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 KLHL32Q96NJ5 620 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CITED4Q96RK1 184 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MINPP1Q9UNW1 487 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SLC12A4Q9UP95 1085 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MYL12BO14950 172 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 BNIP3LO60238 219 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SGPL1O95470 568 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SOAT1P35610 550 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 TWF2Q6IBS0 349 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 LRRC10BA6NIK2 292 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SPIRE1Q08AE8 756 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 QPRTQ15274 297 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 BTBD8Q5XKL5 378 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 RNF148Q8N7C7 305 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 C17orf75Q9HAS0 396 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 TRMT6Q9UJA5 497 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CHKBQ9Y259 395 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms