RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 RBP3P10745 1247 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PRG2P13727 222 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CCNOP22674 350 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ACAT1P24752 427 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SERPINB5P36952 375 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 BTN3A2P78410 334 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 HDAC1Q13547 482 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 E2F4Q16254 413 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PKN2Q16513 984 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CCNG2Q16589 344 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SGSM1Q2NKQ1 1148 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 P3H1Q32P28 736 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PPP2R2DQ66LE6 453 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ADGRF2Q8IZF7 708 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 BOLLQ8N9W6 283 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PCYOX1LQ8NBM8 494 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 FIG4Q92562 907 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SEMA4DQ92854 862 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TRIM63Q969Q1 353 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF669Q96BR6 464 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 LRRC46Q96FV0 321 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SNF8Q96H20 258 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF333Q96JL9 665 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 LMLNQ96KR4 655 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 GAL3ST4Q96RP7 486 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 KLF6Q99612 283 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 FAM96AQ9H5X1 160 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 MAGEF1Q9HAY2 307 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TLR7Q9NYK1 1049 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 MRPS7Q9Y2R9 242 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 A0A0B4J269 797 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SAC3D1A6NKF1 404 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 STX16-NPEPL1H3BU86 382 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 STX16O14662 325 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SLC28A2O43868 658 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 MT-CO1P00395 513 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 COX7A2P14406 83 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 NQO1P15559 274 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ATP5JP18859 108 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 NMT1P30419 496 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SERPINB1P30740 379 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 RPA3P35244 121 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CPA2P48052 419 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 COASYQ13057 564 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 RABL6Q3YEC7 729 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PITRM1Q5JRX3 1037 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 KRT73Q86Y46 540 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SEPT1Q8WYJ6 367 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 EDEM1Q92611 657 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TBATAQ96M53 351 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 HIST1H2AAQ96QV6 131 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TTLL2Q9BWV7 592 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 OSBPL1AQ9BXW6 950 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM117Q9H0C3 514 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 NDST4Q9H3R1 872 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 DCTPP1Q9H773 170 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CLIC5Q9NZA1 410 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TSC22D4Q9Y3Q8 395 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM120BA0PK00 339 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CFAP73A6NFT4 308 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 EXTL3O43909 919 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PSIP1O75475 530 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 RGS20O76081 388 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 RHOBTB3O94955 611 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ALBP02768 609 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ATP5BP06576 529 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 NCK1P16333 377 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CASP1P29466 404 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CASRP41180 1078 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 OMPP47874 163 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 GMFBP60983 142 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PRKCEQ02156 737 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 WLSQ5T9L3 541 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 C12orf60Q5U649 245 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 TRIQKQ629K1 86 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CRTC3Q6UUV7 619 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 UTS2BQ765I0 119 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 FBXO15Q8NCQ5 510 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CCT8L2Q96SF2 557 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 GPRC5DQ9NZD1 345 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CLEC4AQ9UMR7 237 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 HCN4Q9Y3Q4 1203 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 LRRC9Q6ZRR7 1453 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 IL6P05231 212 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CCNA2P20248 432 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PSMA4P25789 261 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PRDX5P30044 214 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 PTGER2P43116 358 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 RPL21P46778 160 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 GCLCP48506 637 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CDH8P55286 799 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 CHAF1BQ13112 559 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 KRR1Q13601 381 aaKnown RBP5.94□□□□□ -1.46
BRCA1-203ENST00000357654 SLC29A2Q14542 456 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 XKR4Q5GH76 650 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 MROH9Q5TGP6 573 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ALG1LQ6GMV1 187 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 ADGRG6Q86SQ4 1221 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 LGI2Q8N0V4 545 aa5.94□□□□□ -1.46
BRCA1-203ENST00000357654 DENND6BQ8NEG7 585 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms