RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 HAPLN2Q9GZV7 340 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PLEKHA5Q9HAU0 1116 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CPSF3Q9UKF6 684 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 APPL1Q9UKG1 709 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 AFG3L2Q9Y4W6 797 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 MAFBQ9Y5Q3 323 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 M0QZ92 97 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TRDMT1O14717 391 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 FKBP6O75344 327 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 NCAM1P13591 858 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 FDFT1P37268 417 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PKNOX1P55347 436 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 DYNC1I2Q13409 638 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC12A1Q13621 1099 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CA9Q16790 459 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PPM1JQ5JR12 505 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CCNJLQ8IV13 435 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 C10orf107Q8IVU9 208 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 DENND1AQ8TEH3 1009 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 AFG1LQ8WV93 481 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 MARK4Q96L34 752 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 KLHL4Q9C0H6 718 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ILKAPQ9H0C8 392 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 VPS33BQ9H267 617 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PLA2G4CQ9UP65 541 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 HBS1LQ9Y450 684 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 TNRC6CQ9HCJ0 1690 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 A0A096LPK6 155 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 GPR25O00155 361 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SNUPNO95149 360 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 PGM3O95394 542 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 BPGMP07738 259 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC25A11Q02978 314 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 ADIGQ0VDE8 80 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ACAP1Q15027 740 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PCSK7Q16549 785 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PLEKHG4Q58EX7 1191 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 SPDYAQ5MJ70 313 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SCARA3Q6AZY7 606 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 LRRC8EQ6NSJ5 796 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 MTHFD1LQ6UB35 978 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 MPP5Q8N3R9 675 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TDRD5Q8NAT2 981 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 OR6P1Q8NGX9 317 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 OLIG1Q8TAK6 271 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC2A14Q8TDB8 520 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CATSPER2Q96P56 530 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CYP4F12Q9HCS2 524 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TCF7L2Q9NQB0 619 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 DDIT4Q9NX09 232 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 STX18Q9P2W9 335 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 PCDHGC3Q9UN70 934 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 EFR3BQ9Y2G0 817 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CNTNAP2Q9UHC6 1331 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 MAST2Q6P0Q8 1798 aa7.02□□□□□ -1.28
RTN4-203ENST00000357376 BHMG1C9JSJ3 638 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 PLSCR1O15162 318 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 DNAJC6O75061 913 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RGS20O76081 388 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SEC24DO94855 1032 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 TGFB3P10600 412 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 GRK2P25098 689 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RPS12P25398 132 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 ATICP31939 592 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 GP5P40197 560 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 MRPS22P82650 360 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 GRM1Q13255 1194 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RALGPS1Q5JS13 557 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 TREML2Q5T2D2 321 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 TMEM63BQ5T3F8 832 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 OLFML2BQ68BL8 750 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ITPRIPL1Q6GPH6 555 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 TLDC1Q6P9B6 456 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 C15orf39Q6ZRI6 1047 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CDHR3Q6ZTQ4 885 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SNX32Q86XE0 403 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 DEFB106AQ8N104 65 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 OR52K1Q8NGK4 314 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 NDRG1Q92597 394 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 PPP2R3CQ969Q6 453 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CELF6Q96J87 481 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 ELMO2Q96JJ3 720 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ZNF560Q96MR9 790 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 TBCBQ99426 244 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 OSMRQ99650 979 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 MIPEPQ99797 713 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PDGFDQ9GZP0 370 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 LHX5Q9H2C1 402 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 DNAJC5Q9H3Z4 198 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 IL1RL2Q9HB29 575 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 XPO1O14980 1071 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 MAGEB2O15479 319 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PHGDHO43175 533 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 MSCO60682 206 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CILPO75339 1184 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 HOXC6P09630 235 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 BCAT1P54687 386 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SH3BGRP55822 239 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms