RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 NPNTQ6UXI9 565 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 SPATA31D4Q6ZUB0 917 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 SYDE1Q6ZW31 735 aaPredicted RBP14.12□□□□□ -0.15
HOXA1-202ENST00000355633 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 GSPT2Q8IYD1 628 aaKnown RBP14.12□□□□□ -0.15
HOXA1-202ENST00000355633 SEC14L1Q92503 715 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 TRMT2BQ96GJ1 504 aaKnown RBP14.12□□□□□ -0.15
HOXA1-202ENST00000355633 DPH5Q9H2P9 285 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 ARFGAP3Q9NP61 516 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 DRG1Q9Y295 367 aaKnown RBP14.12□□□□□ -0.15
HOXA1-202ENST00000355633 TLR6Q9Y2C9 796 aa14.12□□□□□ -0.15
HOXA1-202ENST00000355633 MCF2LO15068 1137 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 DAPK3O43293 454 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 TLR5O60602 858 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 TBX18O95935 607 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 ITGAVP06756 1048 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 CA3P07451 260 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 AMPD1P23109 780 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 KLRC2P26717 231 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 TBX4P57082 545 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 EIF3EP60228 445 aaKnown RBP14.11□□□□□ -0.15
HOXA1-202ENST00000355633 SEMA3BQ13214 749 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 PLD1Q13393 1074 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 NNTQ13423 1086 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 CUL1Q13616 776 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 NOMO1Q15155 1222 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 DUPD1Q68J44 220 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 MRPL43Q8N983 215 aaKnown RBP14.11□□□□□ -0.15
HOXA1-202ENST00000355633 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
HOXA1-202ENST00000355633 PRDM16Q9HAZ2 1276 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 FAM114A2Q9NRY5 505 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 MARCH2Q9P0N8 246 aa14.11□□□□□ -0.15
HOXA1-202ENST00000355633 C2orf71A6NGG8 1288 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 FAM72CH0Y354 149 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 LPXNO60711 386 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SLC2A3P11169 496 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 ZNF135P52742 658 aaPredicted RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TPI1P60174 286 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 PTK6Q13882 451 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 HLTFQ14527 1009 aaKnown RBP eCLIP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 FAM72AQ5TYM5 149 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SNX30Q5VWJ9 437 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 FAM72DQ6L9T8 149 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 LILRA6Q6PI73 481 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 RFX8Q6ZV50 586 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 DNAJB7Q7Z6W7 309 aaPredicted RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 FAM72BQ86X60 149 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 DDX42Q86XP3 938 aaKnown RBP eCLIP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 MICAL1Q8TDZ2 1067 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 PSMG2Q969U7 264 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SLC39A13Q96H72 371 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 HAPLN3Q96S86 360 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 EPAS1Q99814 870 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 ARHGEF4Q9NR80 690 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 UXTQ9UBK9 157 aaPredicted RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 OR12D3Q9UGF7 316 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 NFU1Q9UMS0 254 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 HEY1Q9Y5J3 304 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SEC31AO94979 1220 aaKnown RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 RBP3P10745 1247 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 HCAR3P49019 387 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 DRG2P55039 364 aaKnown RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TRIP4Q15650 581 aaPredicted RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 CCDC149Q6ZUS6 474 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TADA2BQ86TJ2 420 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 ITIH5Q86UX2 942 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 MIB1Q86YT6 1006 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 ZNF276Q8N554 614 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 EIF1ADQ8N9N8 165 aaKnown RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 FCRL2Q96LA5 508 aaPredicted RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SAMD11Q96NU1 681 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TGS1Q96RS0 853 aaKnown RBP14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TMEM121Q9BTD3 319 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 OSBPL2Q9H1P3 480 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 TRPM5Q9NZQ8 1165 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 ASIC3Q9UHC3 531 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SNX24Q9Y343 169 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 PCDHA11Q9Y5I1 949 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SNX10Q9Y5X0 201 aa14.1□□□□□ -0.15
HOXA1-202ENST00000355633 SLC12A8A0AV02 714 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 ZNF840PA6NDX5 716 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 KCNU1A8MYU2 1149 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 SGK1O00141 431 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 GRM6O15303 877 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 PAGE1O75459 146 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 MOCS2O96007 188 aaPredicted RBP14.09□□□□□ -0.15
HOXA1-202ENST00000355633 GLUD1P00367 558 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 APOEP02649 317 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 LRG1P02750 347 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 PPP3CCP48454 512 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 NR2C2P49116 596 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 DPYSQ14117 519 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 TRIP13Q15645 432 aaPredicted RBP14.09□□□□□ -0.15
HOXA1-202ENST00000355633 BEND6Q5SZJ8 279 aaPredicted RBP14.09□□□□□ -0.15
HOXA1-202ENST00000355633 HECTD3Q5T447 861 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms