RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KRT74Q7RTS7 529 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPATA16Q9BXB7 569 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 TRIM39Q9HCM9 518 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 C2orf81A6NN90 581 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 NDUFB10O96000 172 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 CSF1RP07333 972 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 MASTLQ96GX5 879 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 MYBL2P10244 700 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 MSLNQ13421 630 aaPredicted RBP13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 KRT78Q8N1N4 520 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 RIBC2Q9H4K1 309 aa13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.32
SYNCRIP-201ENST00000355238 MED24O75448 989 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 NPTXRO95502 500 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 DLG4P78352 724 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 ADHFE1Q8IWW8 467 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 PPP1R14BQ96C90 147 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 SERPIND1P05546 499 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 ETS2P15036 469 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 PKNOX1P55347 436 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC25A3Q00325 362 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 PKN1Q16512 942 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 PGS1Q32NB8 556 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 USP39Q53GS9 565 aaKnown RBP13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 MFSD4BQ5TF39 518 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 XRRA1Q6P2D8 792 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF605Q86T29 641 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 KBTBD8Q8NFY9 601 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 DUSP9Q99956 384 aaKnown RBP13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 AP4B1Q9Y6B7 739 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 DDX3XO00571 662 aaKnown RBP eCLIP13.02□□□□□ -0.333e-18■■□□□ 13.2
SYNCRIP-201ENST00000355238 LSM1O15116 133 aaKnown RBP13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 SHOX2O60902 331 aaPredicted RBP13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 LPIN1Q14693 890 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 AKAP14Q86UN6 197 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 CDH9Q9ULB4 789 aa13.02□□□□□ -0.33
SYNCRIP-201ENST00000355238 A0A096LPK6 155 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCAM2O15394 837 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CPB1P15086 417 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 MMP13P45452 471 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ACAP1Q15027 740 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 IER5Q5VY09 327 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 FAM172AQ8WUF8 416 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 COL15A1P39059 1388 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 MSH4O15457 936 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCAM1P13591 858 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PCSK1P29120 753 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 IL12AP29459 219 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 LRPAP1P30533 357 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ARCQ7LC44 396 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 DYRK4Q9NR20 520 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ABCB10Q9NRK6 738 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PARNO95453 639 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 SERPINA6P08185 405 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 COX4I1P13073 169 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CD151P48509 253 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 TNK2Q07912 1038 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 NR6A1Q15406 480 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ATG14Q6ZNE5 492 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ULK2Q8IYT8 1036 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CENPIQ92674 756 aaPredicted RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPY30Q9C005 99 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PIF1Q9H611 641 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 M0QYT0 321 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 TRIM38O00635 465 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 MYL12BO14950 172 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 ACAT1P24752 427 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 C2CD6Q53TS8 623 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PTCD3Q96EY7 689 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCDC167Q9P0B6 97 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms