RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 PIGZQ86VD9 579 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 ALLCQ8N6M5 410 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 BHMTQ93088 406 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 WBP2Q969T9 261 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 CDK5RAP1Q96SZ6 601 aaKnown RBP12.06□□□□□ -0.48
CDRT1-202ENST00000354433 BBS2Q9BXC9 721 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 FAM124BQ9H5Z6 455 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-202ENST00000354433 ZDHHC4Q9NPG8 344 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 SEMA4GQ9NTN9 838 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 DEC1Q9P2X7 70 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 MMP17Q9ULZ9 603 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 SPTBN4Q9H254 2564 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 DCHS1Q96JQ0 3298 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 A0A0U1RQJ8 604 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 CTAGE9A4FU28 777 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ANTXRLA6NF34 631 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PRR5-ARHGAP8B1AHC4 643 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 FANCGO15287 622 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 HOXC11O43248 304 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 LRP3O75074 770 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ALDH1A2O94788 518 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 HMBSP08397 361 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 SDHBP21912 280 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 BCAT1P54687 386 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 MRPS21P82921 87 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ARHGAP8P85298 464 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 FOXK2Q01167 660 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PTK2Q05397 1052 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 MESP2Q0VG99 397 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 EFEMP1Q12805 493 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ELF2Q15723 593 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ARHGAP17Q68EM7 881 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 GJB7Q6PEY0 223 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ENOSF1Q7L5Y1 443 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 KBTBD6Q86V97 674 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TMEM25Q86YD3 366 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 SFTPA1Q8IWL2 248 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 C12orf50Q8NA57 414 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ANKRD52Q8NB46 1076 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 XPO6Q96QU8 1125 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 KLF16Q9BXK1 252 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ARRDC1-AS1Q9H2J1 176 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 LRRC4Q9HBW1 653 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 BCCIPQ9P287 314 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ZNF292O60281 2723 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 DCLK1O15075 740 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TULP3O75386 442 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PLA2G4AP47712 749 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TKTL1P51854 596 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 MFAP3P55082 362 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 CCDC6Q16204 474 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 CRY1Q16526 586 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 AASDHQ4L235 1098 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 EOGTQ5NDL2 527 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 GRAMD4Q6IC98 578 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 HTR3DQ70Z44 454 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ZNF571Q7Z3V5 609 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 SIX6OS1Q8N1H7 587 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PGBD3Q8N328 593 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 SLC35F6Q8N357 371 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ARHGAP18Q8N392 663 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 ZNF513Q8N8E2 541 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 TERB1Q8NA31 727 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 MDGA1Q8NFP4 955 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 NAPGQ99747 312 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 LACRTQ9GZZ8 138 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 POLMQ9NP87 494 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-202ENST00000354433 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 INTUQ9ULD6 942 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 STRIP2Q9ULQ0 834 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 NENFQ9UMX5 172 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 PCDHB4Q9Y5E5 795 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 USP3Q9Y6I4 520 aa12.05□□□□□ -0.48
CDRT1-202ENST00000354433 FRYLO94915 3013 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 A0A087X0T9 212 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 SGK1O00141 431 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 XPO1O14980 1071 aaKnown RBP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 URI1O94763 535 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 FAM228BP0C875 321 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms