RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SSX2IPQ9Y2D8 614 aa21.27■■□□□ 1
TRIM4-202ENST00000354241 H7C0C1 242 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 LILRB3O75022 631 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 IFNB1P01574 187 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 ETS1P14921 441 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 CCR1P32246 355 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 ATP5OP48047 213 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 TPI1P60174 286 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 EFEMP1Q12805 493 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 BRMS1LQ5PSV4 323 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 NCBP2-AS2Q69YL0 99 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 DARS2Q6PI48 645 aaKnown RBP21.26■□□□□ 0.99
TRIM4-202ENST00000354241 RFX8Q6ZV50 586 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 GPR65Q8IYL9 337 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 GLIS1Q8NBF1 620 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 RSAD2Q8WXG1 361 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 SNF8Q96H20 258 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 OLA1Q9NTK5 396 aaKnown RBP21.26■□□□□ 0.99
TRIM4-202ENST00000354241 ARHGEF38Q9NXL2 777 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 MFHAS1Q9Y4C4 1052 aa21.26■□□□□ 0.99
TRIM4-202ENST00000354241 ATP8B1O43520 1251 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CSPG5O95196 566 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 ZSCAN5DPP0CG00 497 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 KLRC2P26717 231 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CALCOCO2Q13137 446 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 NNTQ13423 1086 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 C10orf120Q5SQS8 335 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 ZDHHC24Q6UX98 284 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 TMC7Q7Z402 723 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 RXFP1Q9HBX9 757 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 ZDHHC18Q9NUE0 388 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CXCL14O95715 111 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 TBX18O95935 607 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CSH1P0DML2 217 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CSH2P0DML3 217 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 GGCXP38435 758 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 GBE1Q04446 702 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 SEMA3BQ13214 749 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 TAF12Q16514 161 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 FBXO25Q8TCJ0 367 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 CCHCR1Q8TD31 782 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 FMO2Q99518 471 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 EPAS1Q99814 870 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 WHRNQ9P202 907 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 OR12D3Q9UGF7 316 aa21.25■□□□□ 0.99
TRIM4-202ENST00000354241 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.24■□□□□ 0.99
TRIM4-202ENST00000354241 MOCS2O96007 188 aaPredicted RBP21.24■□□□□ 0.99
TRIM4-202ENST00000354241 CNPP09543 421 aaKnown RBP21.24■□□□□ 0.99
TRIM4-202ENST00000354241 BMPR1AP36894 532 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 GDF10P55107 478 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 TWF1Q12792 350 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 DPYSQ14117 519 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 PPP2R5DQ14738 602 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 VEPH1Q14D04 833 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 UNC45BQ8IWX7 931 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 UBE2OQ9C0C9 1292 aaKnown RBP21.24■□□□□ 0.99
TRIM4-202ENST00000354241 SIK2Q9H0K1 926 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 PRDM16Q9HAZ2 1276 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 ALG13Q9NP73 1137 aaKnown RBP21.24■□□□□ 0.99
TRIM4-202ENST00000354241 TLR6Q9Y2C9 796 aa21.24■□□□□ 0.99
TRIM4-202ENST00000354241 ZDHHC11BP0C7U3 371 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 SPATA31D3P0C874 917 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 IVDP26440 423 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 TBX4P57082 545 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 SLC10A2Q12908 348 aaPredicted RBP21.23■□□□□ 0.99
TRIM4-202ENST00000354241 SPATA31D4Q6ZUB0 917 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 MIB1Q86YT6 1006 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 CCDC33Q8N5R6 958 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 ART4Q93070 314 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 ZNF512Q96ME7 567 aaPredicted RBP21.23■□□□□ 0.99
TRIM4-202ENST00000354241 CCSER2Q9H7U1 834 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 PCDH9Q9HC56 1237 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 MAP2K7O14733 419 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 TLR5O60602 858 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 PAGE1O75459 146 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 HMGA1P17096 107 aaKnown RBP21.23■□□□□ 0.99
TRIM4-202ENST00000354241 ITIH2P19823 946 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 NR2C2P49116 596 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 PLD1Q13393 1074 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 TCEAL8Q8IYN2 117 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 FAM71DQ8N9W8 422 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 PDZD8Q8NEN9 1154 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 HAPLN3Q96S86 360 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 TCF25Q9BQ70 676 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 OSBPL2Q9H1P3 480 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 ENTPD7Q9NQZ7 604 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 MARCH2Q9P0N8 246 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 INSL5Q9Y5Q6 135 aa21.23■□□□□ 0.99
TRIM4-202ENST00000354241 LINC01553A4QN01 128 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 MFSD11O43934 449 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 ERCC2P18074 760 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 HCAR3P49019 387 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 ZNF135P52742 658 aaPredicted RBP21.22■□□□□ 0.99
TRIM4-202ENST00000354241 ITGA8P53708 1063 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 GPS1Q13098 491 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 P3H1Q32P28 736 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 IZUMO3Q5VZ72 239 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 LRRN4Q8WUT4 740 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 OVCA2Q8WZ82 227 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 FCRL2Q96LA5 508 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms