RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CTAGE3PQ8IX95 158 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 AFAP1L2Q8N4X5 818 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TEX9Q8N6V9 391 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 C10orf82Q8WW14 230 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 UPF1Q92900 1129 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNF38-203ENST00000353739 OSMRQ99650 979 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 RETREG1Q9H6L5 497 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 USP29Q9HBJ7 922 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MRM3Q9HC36 420 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 FAM49BQ9NUQ9 324 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 HACD3Q9P035 362 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 AAR2Q9Y312 384 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TIMM44O43615 452 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ATP2C2O75185 946 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 DUSP11O75319 330 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 TMEM63AO94886 807 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 THP07101 528 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 C6orf222P0C671 652 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 ZNF865P0CJ78 1059 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 SLC2A3P11169 496 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MYL4P12829 197 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TYMPP19971 482 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 HOXC8P31273 242 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 FCGRTP55899 365 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 HDAC4P56524 1084 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 IRX4P78413 519 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ZBTB16Q05516 673 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MGAT5Q09328 741 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 GRIK3Q13003 919 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ZKSCAN8Q15776 578 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 C15orf59Q2T9L4 293 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 ANO4Q32M45 955 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 CMPK2Q5EBM0 449 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PPP6R3Q5H9R7 873 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 WLSQ5T9L3 541 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 FBXW10Q5XX13 1052 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 NCBP2-AS2Q69YL0 99 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TXNRD3NBQ6F5E7 133 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 NAPEPLDQ6IQ20 393 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MRPL10Q7Z7H8 261 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 CYP4X1Q8N118 509 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 C4orf33Q8N1A6 199 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 SMC1BQ8NDV3 1235 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PCDH19Q8TAB3 1148 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 URGCPQ8TCY9 931 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TCP10LQ8TDR4 215 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 RNF139Q8WU17 664 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MZB1Q8WU39 189 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PPP1R10Q96QC0 940 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 SYT15Q9BQS2 421 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 NOD2Q9HC29 1040 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 BATF3Q9NR55 127 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 BCAP29Q9UHQ4 241 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 DNM1LO00429 736 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 NEBLO76041 1014 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 KLHL2O95198 593 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 CD48P09326 243 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 SPRP35270 261 aaPredicted RBP3.84□□□□□ -1.8
RNF38-203ENST00000353739 WASHC5Q12768 1159 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 ORC1Q13415 861 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 TSNAXIP1Q2TAA8 658 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 NPNTQ6UXI9 565 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 RFX8Q6ZV50 586 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 CYP4V2Q6ZWL3 525 aaPredicted RBP3.84□□□□□ -1.8
RNF38-203ENST00000353739 BNIPLQ7Z465 357 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 WDR75Q8IWA0 830 aaKnown RBP3.84□□□□□ -1.8
RNF38-203ENST00000353739 PPM1NQ8N819 430 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 COLGALT1Q8NBJ5 622 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 SLC2A14Q8TDB8 520 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 KBTBD7Q8WVZ9 684 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 DNAJB3Q8WWF6 145 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 E2F7Q96AV8 911 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 NSL1Q96IY1 281 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 TSGA13Q96PP4 275 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 PPP1R16BQ96T49 567 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 APOL6Q9BWW8 343 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 EIF2AQ9BY44 585 aaKnown RBP3.84□□□□□ -1.8
RNF38-203ENST00000353739 MYLK2Q9H1R3 596 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 VCX3BQ9H321 246 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 ZNF408Q9H9D4 720 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 ETNK1Q9HBU6 452 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 KRT82Q9NSB4 513 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 PLLPQ9Y342 182 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 MAD1L1Q9Y6D9 718 aa3.84□□□□□ -1.8
RNF38-203ENST00000353739 TRIM49D1C9J1S8 452 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 GABRDO14764 452 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 LIN7AO14910 233 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 SLC22A2O15244 555 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 ANXA9O76027 345 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 USP1O94782 785 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CELF2O95319 508 aaKnown RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 ALDH1A1P00352 501 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CYP11A1P05108 521 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 APRTP07741 180 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 PRDX6P30041 224 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 SSTR1P30872 391 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 WDR4P57081 412 aaKnown RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 ADAM17P78536 824 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms