RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 A0A087WZ62 844 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 FZD9O00144 591 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 ITM2AO43736 263 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 SMIM24O75264 130 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 LYPLA1O75608 230 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 ALDOAP04075 364 aaKnown RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 ARF4P18085 180 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 CACNA2D1P54289 1103 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 KYAT1Q16773 422 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 RNF220Q5VTB9 566 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 WDR75Q8IWA0 830 aaKnown RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 SCUBE3Q8IX30 993 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 UNC5BQ8IZJ1 945 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 SLC35F5Q8WV83 523 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 NR1H4Q96RI1 486 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 MPHOSPH6Q99547 160 aaKnown RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 FDXACB1Q9BRP7 624 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 MTMR10Q9NXD2 777 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 GGA3Q9NZ52 723 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 GTF2IRD1Q9UHL9 959 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 DNAJC16Q9Y2G8 782 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 A0A088AWK7 358 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 MEI4A8MW99 385 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 GLRA3O75311 464 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 PGK2P07205 417 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 RPL10AP62906 217 aaKnown RBP25.29■■□□□ 1.64
CPNE1-202ENST00000352393 IRX4P78413 519 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 SATB1Q01826 763 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 PRKG1Q13976 671 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 N4BP2L1Q5TBK1 243 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-202ENST00000352393 IZUMO2Q6UXV1 221 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 FBXO16Q8IX29 292 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-202ENST00000352393 PPP1R14CQ8TAE6 165 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 APOL6Q9BWW8 343 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 DHX35Q9H5Z1 703 aaKnown RBP25.29■■□□□ 1.64
CPNE1-202ENST00000352393 SLC17A6Q9P2U8 582 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 SCN1AP35498 2009 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 OTOFQ9HC10 1997 aa25.29■■□□□ 1.64
CPNE1-202ENST00000352393 WDR27A2RRH5 827 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 C6orf222P0C671 652 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-202ENST00000352393 MLNP12872 115 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 C16orf46Q6P387 395 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PACS1Q6VY07 963 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 LINC01465Q8N7H1 131 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 TRAPPC9Q96Q05 1148 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 B3GNT5Q9BYG0 378 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 RNPEPQ9H4A4 650 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PPM1HQ9ULR3 514 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 AP4E1Q9UPM8 1137 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PPP2R3BQ9Y5P8 575 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 RALGAPA2Q2PPJ7 1873 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 TPP1O14773 563 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PLIN3O60664 434 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 CNMDO75829 334 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 CRABP2P29373 138 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 DSG1Q02413 1049 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 VGLL4Q14135 290 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PCLAFQ15004 111 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 HEATR6Q6AI08 1181 aaKnown RBP25.28■■□□□ 1.64
CPNE1-202ENST00000352393 DENND5BQ6ZUT9 1274 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 ACOT1Q86TX2 421 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 ZDHHC17Q8IUH5 632 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 CCDC33Q8N5R6 958 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 CENPIQ92674 756 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-202ENST00000352393 CSPG4P5Q96PW8 444 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 KCTD15Q96SI1 283 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-202ENST00000352393 PPP1R16BQ96T49 567 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 ECSITQ9BQ95 431 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 MRPL45Q9BRJ2 306 aaKnown RBP25.28■■□□□ 1.64
CPNE1-202ENST00000352393 XPNPEP3Q9NQH7 507 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 FAM49BQ9NUQ9 324 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 DTLQ9NZJ0 730 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 MORF4L1Q9UBU8 362 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 NME7Q9Y5B8 376 aa25.28■■□□□ 1.64
CPNE1-202ENST00000352393 A6NJR5 290 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 FKBP6O75344 327 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 GNAT1P11488 350 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 VAV1P15498 845 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 SLC1A6P48664 564 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 PDE1CQ14123 709 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-202ENST00000352393 C11orf91Q3C1V1 193 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 THEMIS2Q5TEJ8 643 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 FOXB2Q5VYV0 432 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 NCBP2-AS2Q69YL0 99 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 SLC30A9Q6PML9 568 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 ADGRG6Q86SQ4 1221 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 NT5DC4Q86YG4 428 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 OLFM3Q96PB7 478 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 MAGEB5Q9BZ81 275 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 USP2O75604 605 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-202ENST00000352393 ATXN1P54253 815 aaKnown RBP25.27■■□□□ 1.64
CPNE1-202ENST00000352393 IGBP1P78318 339 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 SARNPP82979 210 aaKnown RBP25.27■■□□□ 1.64
CPNE1-202ENST00000352393 MAVSQ7Z434 540 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 MMP19Q99542 508 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 PIDD1Q9HB75 910 aa25.27■■□□□ 1.64
CPNE1-202ENST00000352393 A0A0A0MRY4 1105 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 BUD23O43709 281 aaKnown RBP25.26■■□□□ 1.63
CPNE1-202ENST00000352393 DGKIO75912 1065 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 PRKCGP05129 697 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms