RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FAM131BQ86XD5 332 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 DEFB106AQ8N104 65 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 B3GALNT2Q8NCR0 500 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 GIMAP7Q8NHV1 300 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 RAB3IL1Q8TBN0 382 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 NT5C3BQ969T7 300 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 ALDH1A2O94788 518 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 YBX3P16989 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
UPF3A-201ENST00000351487 EPHB2P29323 1055 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 ADIGQ0VDE8 80 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 IRF5Q13568 498 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 HIC1Q14526 733 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 FAM91A1Q658Y4 838 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 DENND5BQ6ZUT9 1274 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 LONP2Q86WA8 852 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 TOP6BLQ8N6T0 577 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 DNAJB3Q8WWF6 145 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 PTCD3Q96EY7 689 aaKnown RBP22.84■■□□□ 1.25
UPF3A-201ENST00000351487 DUSP16Q9BY84 665 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 MFSD11O43934 449 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 HUS1O60921 280 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 CRHR1P34998 444 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 CCDC33Q8N5R6 958 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 NSMCE1Q8WV22 266 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 RNF39Q9H2S5 420 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 GOLGA2P5Q9HBQ8 144 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 SPON1Q9HCB6 807 aa22.84■■□□□ 1.25
UPF3A-201ENST00000351487 I3L4J1 428 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 OPHN1O60890 802 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 SERPINB3P29508 390 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 CCNG1P51959 295 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 MFSD10Q14728 455 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 ATG16L1Q676U5 607 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 MARK2Q7KZI7 788 aaKnown RBP22.83■■□□□ 1.25
UPF3A-201ENST00000351487 OSTM1Q86WC4 334 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.83■■□□□ 1.25
UPF3A-201ENST00000351487 NPY6RQ99463 290 aa22.83■■□□□ 1.25
UPF3A-201ENST00000351487 PARK7Q99497 189 aaKnown RBP22.83■■□□□ 1.25
UPF3A-201ENST00000351487 CCDC22O60826 627 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 IBSPP21815 317 aaPredicted RBP22.82■■□□□ 1.24
UPF3A-201ENST00000351487 GLUD2P49448 558 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 LILRA4P59901 499 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 KRT72Q14CN4 511 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 WASHC2DQ5SRD0 308 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 LRRC8BQ6P9F7 803 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 ARMC2Q8NEN0 867 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 RNF139Q8WU17 664 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 PPP1R13LQ8WUF5 828 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 DEPDC1BQ8WUY9 529 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 KCTD13Q8WZ19 329 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 FAM149B1Q96BN6 582 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 LGMNQ99538 433 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 RNPEPL1Q9HAU8 725 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 H3BRJ5 948 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 PEX11AO75192 247 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 NPR3P17342 541 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 ELF1P32519 619 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 NOS2P35228 1153 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 SLC8A3P57103 927 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 CDK18Q07002 472 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 BST1Q10588 318 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 TEX44Q53QW1 395 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 E2F7Q96AV8 911 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 MIPEPQ99797 713 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 MECRQ9BV79 373 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 FBXO6Q9NRD1 293 aaPredicted RBP22.82■■□□□ 1.24
UPF3A-201ENST00000351487 PCMTD2Q9NV79 361 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 ARL8BQ9NVJ2 186 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 KCNK4Q9NYG8 393 aa22.82■■□□□ 1.24
UPF3A-201ENST00000351487 HAS3O00219 553 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 BIRC5O15392 142 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 STK10O94804 968 aaKnown RBP22.81■■□□□ 1.24
UPF3A-201ENST00000351487 MYL2P10916 166 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 OCRLQ01968 901 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 NIPAL4Q0D2K0 466 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 CCNJLQ8IV13 435 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 COLGALT1Q8NBJ5 622 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 SLC13A1Q9BZW2 595 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 IPPQ9Y573 584 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 FAM163BP0C2L3 166 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 LRPAP1P30533 357 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 TMPRSS15P98073 1019 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 DBN1Q16643 649 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 DCAF6Q58WW2 860 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 MROH9Q5TGP6 573 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 NDUFAF2Q8N183 169 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 NSL1Q96IY1 281 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 SLC2A13Q96QE2 648 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 ZNF408Q9H9D4 720 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 STAP1Q9ULZ2 295 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 NR2E3Q9Y5X4 410 aa22.81■■□□□ 1.24
UPF3A-201ENST00000351487 SDR42E2A6NKP2 422 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 RNF103O00237 685 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 GM2AP17900 193 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 PITX1P78337 314 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 ZBTB16Q05516 673 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 SMG8Q8ND04 991 aaKnown RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 P2RY11Q96G91 374 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms