RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 COLEC11Q9BWP8 271 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 OSBPL2Q9H1P3 480 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 EPN3Q9H201 632 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC134Q9H6E4 229 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM51Q9NW97 253 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 IL37Q9NZH6 218 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 DNAJB4Q9UDY4 337 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 XPO7Q9UIA9 1087 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 MFHAS1Q9Y4C4 1052 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TRIM17Q9Y577 477 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 HEY1Q9Y5J3 304 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 ACTL7BQ9Y614 415 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 RAD54BQ9Y620 910 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TEX264Q9Y6I9 313 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 A0A0A0MRY4 1105 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ERICH4A6NGS2 130 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 OR6C75A6NL08 312 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SMIM23A6NLE4 172 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 FAM72CH0Y354 149 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 GOLGA8MH3BSY2 632 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 EEF2KO00418 725 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CAPN9O14815 690 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 IRAK2O43187 625 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TRAPPC3O43617 180 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 MFSD11O43934 449 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TBC1D4O60343 1298 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 BANF1O75531 89 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 PARNO95453 639 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 METTL18O95568 372 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 EFEMP2O95967 443 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 C1QAP02745 245 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 NCAM1P13591 858 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TPSB2P20231 275 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 HOXC13P31276 330 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CYP2C18P33260 490 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 OR1G1P47890 313 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CDR1P51861 262 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SLC5A3P53794 718 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 BASP1P80723 227 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 NR1H3Q13133 447 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 NME3Q13232 169 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SEMA5AQ13591 1074 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 PDK1Q15118 436 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TPSAB1Q15661 275 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 NFE2Q16621 373 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC38Q502W7 563 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 FAM72AQ5TYM5 149 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 FAM72DQ6L9T8 149 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 MSANTD2Q6P1R3 559 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 VSTM1Q6UX27 236 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF534Q76KX8 674 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TAOK1Q7L7X3 1001 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ANKRD33Q7Z3H0 272 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TADA2BQ86TJ2 420 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TAC4Q86UU9 113 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CAND1Q86VP6 1230 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 FAM72BQ86X60 149 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SPATA2LQ8IUW3 424 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 IGDCC3Q8IVU1 814 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ZBED8Q8IZ13 594 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 PDIK1LQ8N165 341 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ATP11CQ8NB49 1132 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC110Q8TBZ0 833 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 MDM1Q8TC05 714 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SH3TC2Q8TF17 1288 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TFB1MQ8WVM0 346 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ATXN2LQ8WWM7 1075 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ARHGEF2Q92974 986 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SPATA13Q96N96 652 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM175Q9BSA9 504 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 KLC2Q9H0B6 622 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 BRD8Q9H0E9 1235 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SMOC2Q9H3U7 446 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ACSS3Q9H6R3 686 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ETNK1Q9HBU6 452 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 EIF2B3Q9NR50 452 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 DDIT4Q9NX09 232 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 MARCH5Q9NX47 278 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 ARHGEF38Q9NXL2 777 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 CTNNAL1Q9UBT7 734 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 SLC24A2Q9UI40 661 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 RABGEF1Q9UJ41 708 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 PRDM4Q9UKN5 801 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 NEU3Q9UQ49 428 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 PCDHB7Q9Y5E2 793 aa7.15□□□□□ -1.26
TRIM55-203ENST00000350034 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.15□□□□□ -1.26
TRIM55-203ENST00000350034 BRCA2P51587 3418 aa7.15□□□□□ -1.27
TRIM55-203ENST00000350034 EXOC1LA0A1B0GW35 172 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FAM92AA1XBS5 289 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 GMNCA6NCL1 334 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 HOXA2O43364 376 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 OPHN1O60890 802 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 TADA2AO75478 443 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SPAG6O75602 509 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FAM155BO75949 473 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms