RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 FGFR1OP2Q9NVK5 253 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 GGT7Q9UJ14 662 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 hCG_1818297A0A087WSY0 165 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 M0QYT0 321 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 DPYSL4O14531 572 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 ADAM12O43184 909 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 ATP6V1G2O95670 118 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CETN2P41208 172 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 MPP2Q14168 576 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 PPP6R3Q5H9R7 873 aaPredicted RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 ZNF365Q70YC5 407 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CCDC185Q8N715 623 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 SLC7A14Q8TBB6 771 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CKAP2Q8WWK9 683 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 C11orf84Q9BUA3 381 aaPredicted RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 SNRNP25Q9BV90 132 aaKnown RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 CRISPLD1Q9H336 500 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CNGB3Q9NQW8 809 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 CDY1Q9Y6F8 540 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 COL4A6Q14031 1691 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 TCEA3O75764 348 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 UBOX5O94941 541 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 CSPG5O95196 566 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 BRAFP15056 766 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 BHLHA9Q7RTU4 235 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 PYROXD2Q8N2H3 581 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 GDAP1Q8TB36 358 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
UBA3-201ENST00000349511 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 YME1L1Q96TA2 773 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
UBA3-201ENST00000349511 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
UBA3-201ENST00000349511 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
UBA3-201ENST00000349511 CST8O60676 142 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 DAB1O75553 588 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 LTFP02788 710 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 DESP17661 470 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 NOS2P35228 1153 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 PTPN9P43378 593 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 KRT81Q14533 505 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 CCNG2Q16589 344 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 SLC25A52Q3SY17 297 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 OTUD1Q5VV17 481 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 TBC1D1Q86TI0 1168 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 RFX6Q8HWS3 928 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 C7orf61Q8IZ16 206 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 GPATCH11Q8N954 259 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 CMASQ8NFW8 434 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 SEPT5Q99719 369 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 DHX35Q9H5Z1 703 aaKnown RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 NOD2Q9HC29 1040 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 CXXC1Q9P0U4 656 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 TBK1Q9UHD2 729 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 LTBP2Q14767 1821 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 SUN1O94901 812 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 FBXO21O94952 628 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 TJP3O95049 919 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 MAP3K6O95382 1288 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 DNAJB2P25686 324 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 SCNN1AP37088 669 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 DUSP4Q13115 394 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 GALNTL6Q49A17 601 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 IZUMO3Q5VZ72 239 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 BBOF1Q8ND07 529 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 CENPIQ92674 756 aaPredicted RBP13.88□□□□□ -0.19
UBA3-201ENST00000349511 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 PIGVQ9NUD9 493 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 LGALS13Q9UHV8 139 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 PCDHB5Q9Y5E4 795 aa13.88□□□□□ -0.19
UBA3-201ENST00000349511 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 ALPK3Q96L96 1907 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 VNN2O95498 520 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 OR1D2P34982 312 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 USP46P62068 366 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
UBA3-201ENST00000349511 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 E2F5Q15329 346 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 USP41Q3LFD5 358 aa13.87□□□□□ -0.19
UBA3-201ENST00000349511 NPNTQ6UXI9 565 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms