RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TPH1P17752 444 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 EMC10Q5UCC4 262 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 MFSD5Q6N075 450 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 UNC93AQ86WB7 457 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 DNAAF3Q8N9W5 541 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 DUSP16Q9BY84 665 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 NPHS2Q9NP85 383 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 A0A0G2JND7 137 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 SESN3P58005 492 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 ALKAL1Q6UXT8 129 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 RNF139Q8WU17 664 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
TRIM4-201ENST00000349062 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
TRIM4-201ENST00000349062 WDR27A2RRH5 827 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 SOAT2O75908 522 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 HMBSP08397 361 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 KRT16P08779 473 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 NQO1P15559 274 aaKnown RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PNPLA4P41247 253 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 OR1G1P47890 313 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PGGT1BP53609 377 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 FCGRTP55899 365 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 SARNPP82979 210 aaKnown RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PDK2Q15119 407 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PKDCCQ504Y2 493 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 EFHC2Q5JST6 749 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 CAPRIN2Q6IMN6 1127 aaKnown RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PAQR9Q6ZVX9 377 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 TTC39CQ8N584 583 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 MAML1Q92585 1016 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 MECRQ9BV79 373 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PAK5Q9P286 719 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 SFMBT1Q9UHJ3 866 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 GRID1Q9ULK0 1009 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 C15orf41Q9Y2V0 281 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 EPHB2P29323 1055 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 GRIK1P39086 918 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 MATKP42679 507 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 MRPS5P82675 430 aaKnown RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 TAF11Q15544 211 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 LACTB2Q53H82 288 aaPredicted RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 EFHC1Q5JVL4 640 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 DRICH1Q6PGQ1 229 aaPredicted RBP14.35□□□□□ -0.11
TRIM4-201ENST00000349062 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 FAM35AQ86V20 835 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 RMDN2Q96LZ7 410 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 ACSS2Q9NR19 701 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 PCMTD2Q9NV79 361 aa14.35□□□□□ -0.11
TRIM4-201ENST00000349062 DFFAO00273 331 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 LPXNO60711 386 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SUN1O94901 812 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 PSMB4P28070 264 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 TPI1P60174 286 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 HTRA3P83110 453 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SLC26A9Q7LBE3 791 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
TRIM4-201ENST00000349062 GSTCDQ8NEC7 633 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 MYLPFQ96A32 169 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SMOQ99835 787 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 RNF186Q9NXI6 227 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 LRRC37A2A6NM11 1700 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 C5orf60A6NFR6 353 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 RNF103O00237 685 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 ADAM17P78536 824 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
TRIM4-201ENST00000349062 CYTH2Q99418 400 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 ANLNQ9NQW6 1124 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 STAP1Q9ULZ2 295 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 USP15Q9Y4E8 981 aaPredicted RBP14.34□□□□□ -0.11
TRIM4-201ENST00000349062 CCDC189A1A4V9 331 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SETSIPP0DME0 302 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 MGAT1P26572 445 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 BZW1Q7L1Q6 419 aaKnown RBP14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 CRYBG2Q8N1P7 616 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 UNKQ9C0B0 810 aaKnown RBP14.34□□□□□ -0.11
TRIM4-201ENST00000349062 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 ARHGEF4Q9NR80 690 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 MYO7AQ13402 2215 aa14.34□□□□□ -0.11
TRIM4-201ENST00000349062 HAS3O00219 553 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 SCAMP3O14828 347 aaKnown RBP14.33□□□□□ -0.11
TRIM4-201ENST00000349062 HOXD8P13378 290 aaPredicted RBP14.33□□□□□ -0.11
TRIM4-201ENST00000349062 VAV1P15498 845 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms