RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MAFBQ9Y5Q3 323 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-202ENST00000348987 ADGRA2Q96PE1 1338 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 C3orf70A6NLC5 250 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-202ENST00000348987 ARL2P36404 184 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 STT3AP46977 705 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 NR1H2P55055 460 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 TRIM72Q6ZMU5 477 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 SMYD1Q8NB12 490 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 VPS33BQ9H267 617 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 IFT122Q9HBG6 1241 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 INIPQ9NRY2 104 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 FAIMQ9NVQ4 179 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 E9PBE3 544 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 FAM58BPP0C7Q3 252 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 RBP3P10745 1247 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 NCF2P19878 526 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-202ENST00000348987 NAMPTP43490 491 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 MYL6P60660 151 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 TGFB2P61812 414 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 ENPEPQ07075 957 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 CAPSQ13938 189 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 PDK1Q15118 436 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 BBS5Q8N3I7 341 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 DDI1Q8WTU0 396 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 SLC7A3Q8WY07 619 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 DDX56Q9NY93 547 aaKnown RBP19.22■□□□□ 0.67
SCARF1-202ENST00000348987 TJP2Q9UDY2 1190 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 BARX2Q9UMQ3 279 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-202ENST00000348987 TTLL3Q9Y4R7 772 aa19.22■□□□□ 0.67
SCARF1-202ENST00000348987 L1CAMP32004 1257 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF132P52740 706 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 MTTPP55157 894 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 MROH9Q5TGP6 573 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 VWA5B1Q5TIE3 1220 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 POLNQ7Z5Q5 900 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 GALNT4Q8N4A0 578 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 WDTC1Q8N5D0 677 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 TFAP2BQ92481 460 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 SLC35B4Q969S0 331 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF668Q96K58 619 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-202ENST00000348987 LRGUKQ96M69 825 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 TEX13BQ9BXU2 312 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 SMYD2Q9NRG4 433 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 C6orf203Q9P0P8 240 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-202ENST00000348987 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 FBXO21O94952 628 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 CDKL1Q00532 357 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 DNAJC24Q6P3W2 148 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 BORAQ6PGQ7 559 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 SCARA5Q6ZMJ2 495 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 NCCRP1Q6ZVX7 275 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-202ENST00000348987 MAVSQ7Z434 540 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 PHTF2Q8N3S3 785 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 GFM2Q969S9 779 aaKnown RBP19.21■□□□□ 0.67
SCARF1-202ENST00000348987 TMIGD2Q96BF3 282 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 PCYT2Q99447 389 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 ACAD9Q9H845 621 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 RLFQ13129 1914 aa19.21■□□□□ 0.67
SCARF1-202ENST00000348987 TCRBV5S1A1TA0A578 114 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 H0YCG3 227 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 PIGRP01833 764 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 FASTKD1Q53R41 847 aaKnown RBP19.21■□□□□ 0.66
SCARF1-202ENST00000348987 RARS2Q5T160 578 aaKnown RBP19.21■□□□□ 0.66
SCARF1-202ENST00000348987 PDPK2PQ6A1A2 396 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 CMTM5Q96DZ9 223 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 PFDN4Q9NQP4 134 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 THEGQ9P2T0 379 aa19.21■□□□□ 0.66
SCARF1-202ENST00000348987 RSL24D1Q9UHA3 163 aaKnown RBP19.21■□□□□ 0.66
SCARF1-202ENST00000348987 TBXAS1P24557 533 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 LGSNQ5TDP6 509 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 GPAT2Q6NUI2 795 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 C16orf46Q6P387 395 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 ATG14Q6ZNE5 492 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 RAB3IL1Q8TBN0 382 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 CDHR1Q96JP9 859 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 TCHPQ9BT92 498 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 NRDE2Q9H7Z3 1164 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 ASS1P00966 412 aaKnown RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 MSX2P35548 267 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 IDH3AP50213 366 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 EIF3EP60228 445 aaKnown RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 PHEXP78562 749 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 MRPS22P82650 360 aaKnown RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 CYTH1Q15438 398 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 SLFN12LQ6IEE8 588 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 CDR2LQ86X02 465 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 ERI1Q8IV48 349 aaKnown RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 ADGRF2Q8IZF7 708 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 UBR7Q8N806 425 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 COPS7BQ9H9Q2 264 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-202ENST00000348987 CISHQ9NSE2 258 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 PNPOQ9NVS9 261 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 WDR37Q9Y2I8 494 aa19.2■□□□□ 0.66
SCARF1-202ENST00000348987 BIRC5O15392 142 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 FAM189A1O60320 539 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 SPAG6O75602 509 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 KCNA4P22459 653 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 SLC1A6P48664 564 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 TEDDM1Q5T9Z0 273 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms