RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ZSCAN1Q8NBB4 408 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 GSTCDQ8NEC7 633 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 JADE3Q92613 823 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 FNBP1Q96RU3 617 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 C17orf80Q9BSJ5 609 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM120AQ9BXJ8 343 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM117Q9H0C3 514 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 MTIF3Q9H2K0 278 aaKnown RBP5.42□□□□□ -1.54
VCAM1-202ENST00000347652 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 RC3H2Q9HBD1 1191 aaKnown RBP5.42□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM8AQ9HCN3 771 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 INTS13Q9NVM9 706 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 MIOSQ9NXC5 875 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 PCDHB7Q9Y5E2 793 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 KCNMB2Q9Y691 235 aa5.42□□□□□ -1.54
VCAM1-202ENST00000347652 KIAA1671Q9BY89 1806 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 SMIM28A0A1B0GU29 152 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PTGESO14684 152 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 URI1O94763 535 aaPredicted RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 NFICP08651 508 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CYP3A5P20815 502 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PBX3P40426 434 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MLH1P40692 756 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 HNF4AP41235 474 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 DPP6P42658 865 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 GRIA4P48058 902 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 GCLMP48507 274 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 FMO5P49326 533 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZNF75DP51815 510 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 IFI35P80217 286 aaPredicted RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 HTRA4P83105 476 aaPredicted RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TMED1Q13445 227 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 BLMHQ13867 455 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ADGRE1Q14246 886 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 NAB2Q15742 525 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 DUOXA2Q1HG44 320 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CLLU1OSQ5K130 101 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ATAT1Q5SQI0 421 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 RAB12Q6IQ22 244 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ISLR2Q6UXK2 745 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 SV2AQ7L0J3 742 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 VWA5B2Q8N398 1253 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 OR5B17Q8NGF7 314 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PHOSPHO2Q8TCD6 241 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 FNIP1Q8TF40 1166 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CACTINQ8WUQ7 758 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CHTF18Q8WVB6 975 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MYLIPQ8WY64 445 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ARNTL2Q8WYA1 636 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CASD1Q96PB1 797 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PPP1R10Q96QC0 940 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 HHIPQ96QV1 700 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 WDR24Q96S15 920 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 GAD1Q99259 594 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 DNAI2Q9GZS0 605 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PRDM12Q9H4Q4 367 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 COQ4Q9Y3A0 265 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ANK1P16157 1881 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PRRC2BQ5JSZ5 2229 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 NLRC5Q86WI3 1866 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 LINC01553A4QN01 128 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 K7ESF4 209 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MAN1A2O60476 641 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 B4GALT3O60512 393 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 N4BP1O75113 896 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 CCDC159P0C7I6 412 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PORP16435 677 aaPredicted RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PBX1P40424 430 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 POLD2P49005 469 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PPP5CP53041 499 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 KCNMA1Q12791 1236 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM132DQ14C87 1099 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZACNQ401N2 412 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TRIM61Q5EBN2 209 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZNF697Q5TEC3 545 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 KRT39Q6A163 491 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 DENND5BQ6ZUT9 1274 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 SCUBE3Q8IX30 993 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZNF606Q8WXB4 792 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZNF689Q96CS4 500 aaPredicted RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ANKRD36BP1Q96IX9 119 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 HIC2Q96JB3 615 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 ZFP42Q96MM3 310 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 RAD9AQ99638 391 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 TRIM5Q9C035 493 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MTMR12Q9C0I1 747 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 XAB2Q9HCS7 855 aaKnown RBP5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MTMR10Q9NXD2 777 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 MSRAQ9UJ68 235 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 SH3BGRL2Q9UJC5 107 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PCDHA9Q9Y5H5 950 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 PCDHA11Q9Y5I1 949 aa5.41□□□□□ -1.54
VCAM1-202ENST00000347652 COL4A4P53420 1690 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms