RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GET4Q7L5D6 327 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 POLNQ7Z5Q5 900 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 NPAS3Q8IXF0 933 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 CMTM8Q8IZV2 173 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 NTAN1Q96AB6 310 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 SNX12Q9UMY4 172 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 CCL26Q9Y258 94 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 DOCK8Q8NF50 2099 aa19.72■□□□□ 0.75
CHMP4A-201ENST00000347519 H3BQ06 376 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 KIF2AO00139 706 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 SCAMP3O14828 347 aaKnown RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 GREM1O60565 184 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 PRAMEF12O95522 483 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 MOCS2O96007 188 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 KRT1P04264 644 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 CCR1P32246 355 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 AMPD2Q01433 879 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 RING1Q06587 406 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 BOLA3Q53S33 107 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 BRMS1LQ5PSV4 323 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 ATAT1Q5SQI0 421 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 KATNAL2Q8IYT4 538 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 TEKT4Q8WW24 435 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 RNF25Q96BH1 459 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 KCTD15Q96SI1 283 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 SLITRK6Q9H5Y7 841 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 DHX35Q9H5Z1 703 aaKnown RBP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 AP4E1Q9UPM8 1137 aa19.71■□□□□ 0.75
CHMP4A-201ENST00000347519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 C3orf70A6NLC5 250 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM72CH0Y354 149 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 DLL1O00548 723 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 KCNK3O14649 394 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PAGE1O75459 146 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 KRT7P08729 469 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PYGMP11217 842 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PFKLP17858 780 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 L1CAMP32004 1257 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 RWDD2BP57060 319 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 COG7P83436 770 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 SCAPQ12770 1279 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 LLGL1Q15334 1064 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM72AQ5TYM5 149 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM72DQ6L9T8 149 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 CES5AQ6NT32 575 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM72BQ86X60 149 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 UBL4BQ8N7F7 174 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 SMRP1Q8NCR6 262 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 COG1Q8WTW3 980 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FGF13Q92913 245 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 USP13Q92995 863 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 OSBPL9Q96SU4 736 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 HERPUD2Q9BSE4 406 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 POMKQ9H5K3 350 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 RRAGDQ9NQL2 400 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 CD207Q9UJ71 328 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 GOLGA6L7A0A1B0GV03 622 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 GRXCR2A6NFK2 248 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 LEFTY2O00292 366 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 ZNF185O15231 689 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 TUBB4AP04350 444 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 KDELR1P24390 212 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 KPNA1P52294 538 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 MMRN1Q13201 1228 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PIK3R6Q5UE93 754 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 NADSYN1Q6IA69 706 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 MFSD7Q6UXD7 560 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 C14orf80Q86SX3 495 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 ST13P5Q8NFI4 369 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PLD4Q96BZ4 506 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 RSPRY1Q96DX4 576 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 MYADMQ96S97 322 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 UBE2ZQ9H832 354 aaPredicted RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PCDH18Q9HCL0 1135 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 DDX56Q9NY93 547 aaKnown RBP19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 CFAP97Q9P2B7 532 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 ARHGAP26Q9UNA1 814 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 HS3ST4Q9Y661 456 aa19.7■□□□□ 0.74
CHMP4A-201ENST00000347519 PRUNE2Q8WUY3 3088 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 LRRD1A4D1F6 860 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SOBPA7XYQ1 873 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 APOEP02649 317 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 CORO1AP31146 461 aaKnown RBP19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 CDH6P55285 790 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 DPYSL2Q16555 572 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 EFHC2Q5JST6 749 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 ZFYVE27Q5T4F4 411 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 DENND1CQ8IV53 801 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 ARID3BQ8IVW6 561 aaPredicted RBP19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 TTC16Q8NEE8 873 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 EXD1Q8NHP7 514 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 ZSCAN18Q8TBC5 510 aaPredicted RBP19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SH3RF2Q8TEC5 729 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SUSD6Q92537 303 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 MYEOVQ96EZ4 313 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 MS4A14Q96JA4 679 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 RIPOR3Q96MK2 946 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms