RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 NADK2Q4G0N4 442 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 CLEC4DQ8WXI8 215 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 CPXM1Q96SM3 734 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 DNAJC28Q9NX36 388 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 PCDHGC3Q9UN70 934 aa16.01■□□□□ 0.15
R3HDM2-201ENST00000347140 TBC1D12O60347 775 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 C15orf59Q2T9L4 293 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 KLHDC10Q6PID8 442 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 AFAP1L2Q8N4X5 818 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 TDRD5Q8NAT2 981 aaKnown RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 ILKAPQ9H0C8 392 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 TIMMDC1Q9NPL8 285 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 IRF6O14896 467 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 TOP3BO95985 862 aaKnown RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 MMP10P09238 476 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 SUPT20HL2P0C7V6 817 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 GALK1P51570 392 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 CDH8P55286 799 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PKNOX1P55347 436 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 WNT7BP56706 349 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PGBD4Q96DM1 585 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ZNF668Q96K58 619 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 WDR83Q9BRX9 315 aaKnown RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 TJP2Q9UDY2 1190 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 RAB26Q9ULW5 256 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PDLIM1O00151 329 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ATP9BO43861 1147 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 MCF2P10911 925 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ITGAXP20702 1163 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PTGER2P43116 358 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 RNF149Q8NC42 400 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 RTKNQ9BST9 563 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 SDCBP2Q9H190 292 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 RPAP3Q9H6T3 665 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 C20orf96Q9NUD7 363 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 CIDEBQ9UHD4 219 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ERBB2P04626 1255 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ZNF143P52747 638 aaPredicted RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 KLF10Q13118 480 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 LPCAT2Q7L5N7 544 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 TMC7Q7Z402 723 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 NLRP4Q96MN2 994 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PORCNQ9H237 461 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 PAIP2BQ9ULR5 123 aaKnown RBP16■□□□□ 0.15
R3HDM2-201ENST00000347140 FIS1Q9Y3D6 152 aa16■□□□□ 0.15
R3HDM2-201ENST00000347140 ARHGEF37A1IGU5 675 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SLC15A5A6NIM6 579 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 BUD23O43709 281 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SPRP35270 261 aaPredicted RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SLC44A4Q53GD3 710 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 TEX44Q53QW1 395 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 TAS1R3Q7RTX0 852 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 BHLHE22Q8NFJ8 381 aaPredicted RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 CMASQ8NFW8 434 aaPredicted RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 PIH1D1Q9NWS0 290 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 PLIN3O60664 434 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 CCDC166P0CW27 439 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 PRKCHP24723 683 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 CRADDP78560 199 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 XYLT1Q86Y38 959 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 AK5Q9Y6K8 562 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■■■■■ 77.1
R3HDM2-201ENST00000347140 PEX1O43933 1283 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SNNO75324 88 aaPredicted RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 MICAL2O94851 1124 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 POLBP06746 335 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 TEDDM1Q5T9Z0 273 aa15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 PRPF19Q9UMS4 504 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-201ENST00000347140 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 GPC4O75487 556 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 HPCAP84074 193 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 PDE1CQ14123 709 aaPredicted RBP15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 EFCAB1Q9HAE3 211 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 MRPL40Q9NQ50 206 aaKnown RBP15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 GNEQ9Y223 722 aaKnown RBP15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 CDYLQ9Y232 598 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 ME2P23368 584 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 SEPT6Q14141 434 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 TRIM67Q6ZTA4 783 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 FRMD7Q6ZUT3 714 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 PLD5Q8N7P1 536 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 LHX5Q9H2C1 402 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 CNTN6Q9UQ52 1028 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 RPS6KL1Q9Y6S9 549 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 TRMUO75648 421 aaKnown RBP15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 CRTAMO95727 393 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 MSX2P35548 267 aaPredicted RBP15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 ZNF132P52740 706 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 PRAMEP78395 509 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 CCDC153Q494R4 210 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 PACS1Q6VY07 963 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 CCNYL1Q8N7R7 359 aa15.98■□□□□ 0.15
R3HDM2-201ENST00000347140 MCUQ8NE86 351 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms