RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SLC8A1P32418 973 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 CRYBB1P53674 252 aaPredicted RBP15.95■□□□□ 0.14
UPF3B-202ENST00000345865 C4orf22Q6V702 233 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 CLEC20AQ6ZU45 233 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 CLNKQ7Z7G1 428 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 TOP6BLQ8N6T0 577 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 NPY6RQ99463 290 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 SLC13A1Q9BZW2 595 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 SLC17A6Q9P2U8 582 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 PLLPQ9Y342 182 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 C2orf71A6NGG8 1288 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 I6L893 689 aaPredicted RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 CYB561D2O14569 222 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 XPOTO43592 962 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 TROVE2P10155 538 aaKnown RBP eCLIP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 NPR3P17342 541 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 ARL4AP40617 200 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 TWF2Q6IBS0 349 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 ZNF398Q8TD17 642 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 RNF139Q8WU17 664 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 PRR11Q96HE9 360 aaPredicted RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 PPP1R10Q96QC0 940 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 ANLNQ9NQW6 1124 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 TMEM30AQ9NV96 361 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 MOCS1Q9NZB8 636 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 ZFP69BQ9UJL9 534 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 PCDHA11Q9Y5I1 949 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 A0A0A0MRY4 1105 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 WDR27A2RRH5 827 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 GABRDO14764 452 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 NRP1O14786 923 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 DAB1O75553 588 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 FYNP06241 537 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 DLDP09622 509 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 LRPAP1P30533 357 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 CCNFP41002 786 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 ACCSLQ4AC99 568 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 MROH9Q5TGP6 573 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 PDCD7Q8N8D1 485 aaKnown RBP15.94■□□□□ 0.14
UPF3B-202ENST00000345865 COLGALT1Q8NBJ5 622 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 GSTCDQ8NEC7 633 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 STAMBPL1Q96FJ0 436 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 P2RY11Q96G91 374 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 SPATA13Q96N96 652 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 CRTAC1Q9NQ79 661 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 PIGVQ9NUD9 493 aa15.94■□□□□ 0.14
UPF3B-202ENST00000345865 FAM72CH0Y354 149 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 M0QYT0 321 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 CREB3O43889 395 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 ATP5HO75947 161 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 TOMM70O94826 608 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 NOS2P35228 1153 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 NME3Q13232 169 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 MDH1BQ5I0G3 518 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 FAM72AQ5TYM5 149 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 FAM72DQ6L9T8 149 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 FAM72BQ86X60 149 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 TRIM55Q9BYV6 548 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 ZNF395Q9H8N7 513 aaPredicted RBP15.93■□□□□ 0.14
UPF3B-202ENST00000345865 XAB2Q9HCS7 855 aaKnown RBP15.93■□□□□ 0.14
UPF3B-202ENST00000345865 HEY2Q9UBP5 337 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 CELF2O95319 508 aaKnown RBP15.93■□□□□ 0.14
UPF3B-202ENST00000345865 GSTA2P09210 222 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 CACNA2D1P54289 1103 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 MAP3K7CLP57077 242 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 AP1B1Q10567 949 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 ARMC2Q8NEN0 867 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 TBC1D10AQ9BXI6 508 aa15.93■□□□□ 0.14
UPF3B-202ENST00000345865 FBXO6Q9NRD1 293 aaPredicted RBP15.93■□□□□ 0.14
UPF3B-202ENST00000345865 RCOR3Q9P2K3 495 aaPredicted RBP15.93■□□□□ 0.14
UPF3B-202ENST00000345865 C17orf102A2RUQ5 167 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 RNF103O00237 685 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 RARBP10826 455 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 CYP2B6P20813 491 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 HOXC8P31273 242 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 WASHC5Q12768 1159 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 OLIG2Q13516 323 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 PARP6Q2NL67 630 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 HSF5Q4G112 596 aaPredicted RBP15.92■□□□□ 0.14
UPF3B-202ENST00000345865 GPRIN1Q7Z2K8 1008 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 KCTD13Q8WZ19 329 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 PGLYRP2Q96PD5 576 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 SLC2A13Q96QE2 648 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 KCNK16Q96T55 309 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 TMEM120AQ9BXJ8 343 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 PRDM12Q9H4Q4 367 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 PCMTD2Q9NV79 361 aa15.92■□□□□ 0.14
UPF3B-202ENST00000345865 TIMM13Q9Y5L4 95 aaPredicted RBP15.92■□□□□ 0.14
UPF3B-202ENST00000345865 YJEFN3A6XGL0 299 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 HACD1B0YJ81 288 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 E7ENQ6 273 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 TGDSO95455 350 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 NEFHP12036 1026 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 EPHB2P29323 1055 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SERPINB3P29508 390 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 CPT1AP50416 773 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 TKTL1P51854 596 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms