RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PGM2Q96G03 612 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 GRIP2Q9C0E4 1043 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 WDR41Q9HAD4 459 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 DNAJC16Q9Y2G8 782 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 IQGAP1P46940 1657 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 AFF2P51816 1311 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 GPC1P35052 558 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 FASTKQ14296 549 aaKnown RBP19.83■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF846Q147U1 533 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 PGS1Q32NB8 556 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 NOTUMQ6P988 496 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 CAPSLQ8WWF8 208 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 CROTQ9UKG9 612 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 FAUP35544 74 aaKnown RBP19.83■□□□□ 0.77
HDAC4-201ENST00000345617 TTC30AQ86WT1 665 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 POLR1BQ9H9Y6 1135 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 NCAM1P13591 858 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 TNFAIP8L3Q5GJ75 292 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 FAM228AQ86W67 206 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 USP21Q9UK80 565 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 NCOA3Q9Y6Q9 1424 aa19.83■□□□□ 0.77
HDAC4-201ENST00000345617 LINC00854A0A1B0GVQ3 168 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 TNFRSF21O75509 655 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 TCHHL1Q5QJ38 904 aaPredicted RBP19.83■□□□□ 0.76
HDAC4-201ENST00000345617 ARMCX6Q7L4S7 300 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF512BQ96KM6 892 aaPredicted RBP19.83■□□□□ 0.76
HDAC4-201ENST00000345617 POU1F1P28069 291 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 HDAC7Q8WUI4 952 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 PROX1Q92786 737 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 PPP1R14AQ96A00 147 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 CIDEBQ9UHD4 219 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 DLC1Q96QB1 1528 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 TMEM216Q9P0N5 145 aa19.83■□□□□ 0.76
HDAC4-201ENST00000345617 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 DDHD2O94830 711 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 SEC24AO95486 1093 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 ATXN8OSP0DMR3 200 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 KPNA1P52294 538 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 SMAD1Q15797 465 aaKnown RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 USPL1Q5W0Q7 1092 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 TDP2O95551 362 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 CSNK2BP67870 215 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 TRAP1Q12931 704 aaKnown RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 YAF2Q8IY57 180 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 ITFG1Q8TB96 612 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 HAT1O14929 419 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 RFX4Q33E94 735 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 TKFCQ3LXA3 575 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 FUKQ8N0W3 1084 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 KLHL23Q8NBE8 558 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 PJA1Q8NG27 643 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 BORCS5Q969J3 196 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 PSMG1O95456 288 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 CCDC24Q8N4L8 307 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 ROGDIQ9GZN7 287 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 REEP1Q9H902 201 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 TBC1D13Q9NVG8 400 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 GALNT8Q9NY28 637 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 WBP11Q9Y2W2 641 aaKnown RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 PSMD12O00232 456 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 PCSK2P16519 638 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 SLC26A3P40879 764 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF135P52742 658 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 S100A13Q99584 98 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 MAN1C1Q9NR34 630 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 C3orf18Q9UK00 162 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-201ENST00000345617 YWHAQP27348 245 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 MGAT5Q09328 741 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 SPANXN3Q5MJ09 141 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
HDAC4-201ENST00000345617 H3BN98 237 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 HS6ST1O60243 411 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 RIBC2Q9H4K1 309 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 ODC1P11926 461 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 GJA8P48165 433 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 CDK16Q00536 496 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 MPP3Q13368 585 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 EMC2Q15006 297 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 EZH2Q15910 746 aaKnown RBP19.81■□□□□ 0.76
HDAC4-201ENST00000345617 SNIP1Q8TAD8 396 aaKnown RBP19.81■□□□□ 0.76
HDAC4-201ENST00000345617 H7C1W4 665 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 ASMTLO95671 621 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 FAM220AQ7Z4H9 259 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 TAF8Q7Z7C8 310 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 ANKEF1Q9NU02 776 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 CDH9Q9ULB4 789 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 PP2D1A8MPX8 630 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 MGRN1O60291 552 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 FIG4Q92562 907 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 PTDSS1P48651 473 aaKnown RBP19.81■□□□□ 0.76
HDAC4-201ENST00000345617 ERAP2Q6P179 960 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF512Q96ME7 567 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-201ENST00000345617 GPAMQ9HCL2 828 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 SPAG4Q9NPE6 437 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 PLA2G6O60733 806 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms