RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NUP205Q92621 2012 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 GOLGA6CA6NDK9 693 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 OR6C75A6NL08 312 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 EEF2KO00418 725 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 IRAK2O43187 625 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 OPA1O60313 960 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 GOLGA6DP0CG33 693 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 ERCC2P18074 760 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 ATF6P18850 670 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 C16orf59Q7L2K0 433 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 OTOP2Q7RTS6 562 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 PSTKQ8IV42 348 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 FBXO22Q8NEZ5 403 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 EPS8L3Q8TE67 593 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 GIPC2Q8TF65 315 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 FAM129AQ9BZQ8 928 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 ABCC13Q9NSE7 274 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 NEU3Q9UQ49 428 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 LTBP2Q14767 1821 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 BCLAF3A2AJT9 711 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 LRIG2O94898 1065 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 STIP1P31948 543 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 OR1D2P34982 312 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 SLCO1A2P46721 670 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 WDR5P61964 334 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 BASP1P80723 227 aaKnown RBP14.04□□□□□ -0.16
CDC42-202ENST00000344548 CAV1Q03135 178 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 RASIP1Q5U651 963 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 DENND2CQ68D51 928 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 CCDC13Q8IYE1 715 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 CCHCR1Q8TD31 782 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 CEP41Q9BYV8 373 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 IL37Q9NZH6 218 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 OR12D3Q9UGF7 316 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 SCML2Q9UQR0 700 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 GREB1Q4ZG55 1949 aa14.04□□□□□ -0.16
CDC42-202ENST00000344548 FOXO6A8MYZ6 492 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 GOLGA8KD6RF30 607 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 F5H423 210 aaPredicted RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 METTL18O95568 372 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 TTC4O95801 387 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 MAGEA11P43364 429 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 MORF4L2Q15014 288 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 KRT71Q3SY84 523 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 SPDYCQ5MJ68 293 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
CDC42-202ENST00000344548 BBOF1Q8ND07 529 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 RTP4Q96DX8 246 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 ATP6V1G3Q96LB4 118 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 CLSTN3Q9BQT9 956 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 SIK2Q9H0K1 926 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 SAYSD1Q9NPB0 183 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 RCOR3Q9P2K3 495 aaPredicted RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 TLDC2A0PJX2 215 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 H3BRJ5 948 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 F9P00740 461 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 HAPLN1P10915 354 aaPredicted RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 RAG1P15918 1043 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 MAGEA4P43358 317 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 DENND5BQ6ZUT9 1274 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 ANKS3Q6ZW76 656 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 GOLGA6L1Q8N7Z2 621 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 ANKLE1Q8NAG6 615 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 AUTS2Q8WXX7 1259 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 RNF34Q969K3 372 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 SMOC2Q9H3U7 446 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 PRDM12Q9H4Q4 367 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 RRN3Q9NYV6 651 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDC42-202ENST00000344548 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
CDC42-202ENST00000344548 RANBP2P49792 3224 aaKnown RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 MYO18AQ92614 2054 aaKnown RBP14.03□□□□□ -0.16
CDC42-202ENST00000344548 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 FAM92AA1XBS5 289 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 TRIM66O15016 1216 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 AVILO75366 819 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 PIAS1O75925 651 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 SEC24AO95486 1093 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 MYZAPP0CAP1 466 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 IFFO1Q0D2I5 559 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 TAF10Q12962 218 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 LONRF1Q17RB8 773 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 SPOUT1Q5T280 376 aaKnown RBP14.02□□□□□ -0.16
CDC42-202ENST00000344548 SLC8B1Q6J4K2 584 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 CAPN12Q6ZSI9 719 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.16
CDC42-202ENST00000344548 BEND5Q7L4P6 421 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 ANKMY2Q8IV38 441 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 QKIQ96PU8 341 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■□□ 17.4
CDC42-202ENST00000344548 RAB6BQ9NRW1 208 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 ARHGEF38Q9NXL2 777 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 MTRRQ9UBK8 725 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms