RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TTC7BQ86TV6 843 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 HELQQ8TDG4 1101 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
RPL28-201ENST00000344063 NFASCO94856 1347 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 COL1A1P02452 1464 aaPredicted RBP11.19□□□□□ -0.62
RPL28-201ENST00000344063 SLIT2O94813 1529 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 SLCO1B7G3V0H7 640 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 CHADO15335 359 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 MICAL2O94851 1124 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 GLRA2P23416 452 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 PTP4A2Q12974 167 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 VSTM1Q6UX27 236 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 ZDHHC17Q8IUH5 632 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 RBM15BQ8NDT2 890 aaKnown RBP11.19□□□□□ -0.62
RPL28-201ENST00000344063 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 PLA2G4CQ9UP65 541 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 DOLKQ9UPQ8 538 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 SNED1Q8TER0 1413 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 H0YGN5 161 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 ANXA9O76027 345 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 OCM2P0CE71 109 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
RPL28-201ENST00000344063 AMPD1P23109 780 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 SLC1A6P48664 564 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 NR2C2P49116 596 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 PTK2BQ14289 1009 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 MAPK11Q15759 364 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 TMTC4Q5T4D3 741 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 SNX32Q86XE0 403 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 EFCAB1Q9HAE3 211 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.19□□□□□ -0.62
RPL28-201ENST00000344063 NFS1Q9Y697 457 aa11.19□□□□□ -0.62
RPL28-201ENST00000344063 ZMYM2Q9UBW7 1377 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CAPN8A6NHC0 703 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 M0R3G1 203 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CYP2C9P11712 490 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 GFAPP14136 432 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 GP5P40197 560 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 NDST1P52848 882 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 ABCE1P61221 599 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 RPL7AP62424 266 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 KYAT3Q6YP21 454 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 POLIQ9UNA4 740 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 SRP72O76094 671 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 ABCG1P45844 678 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 INPP1P49441 399 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 PSMD7P51665 324 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 GSTA3Q16772 222 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CES3Q6UWW8 571 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 FAM131BQ86XD5 332 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 VPS50Q96JG6 964 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CEP41Q9BYV8 373 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 TBX10O75333 385 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 ESRRBO95718 433 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 F9P00740 461 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CDH8P55286 799 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 PLIN5Q00G26 463 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 FOLH1Q04609 750 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 CCDC15Q0P6D6 951 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 BST2Q10589 180 aaKnown RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 CYP1B1Q16678 543 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 UGCGQ16739 394 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 SEL1L3Q68CR1 1132 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 NET1Q7Z628 596 aaPredicted RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 IPMKQ8NFU5 416 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 NR1H4Q96RI1 486 aaPredicted RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 CATSPERBQ9H7T0 1116 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 RMI1Q9H9A7 625 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 AJAP1Q9UKB5 411 aaPredicted RBP11.18□□□□□ -0.62
RPL28-201ENST00000344063 SORCS3Q9UPU3 1222 aa11.18□□□□□ -0.62
RPL28-201ENST00000344063 LINGO3P0C6S8 592 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 NCAM1P13591 858 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 RPL5P46777 297 aaKnown RBP11.17□□□□□ -0.62
RPL28-201ENST00000344063 ZNF235Q14590 738 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 FAM83EQ2M2I3 478 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 CCDC81Q6ZN84 652 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.17□□□□□ -0.629e-6■□□□□ 10.2
RPL28-201ENST00000344063 RMND5BQ96G75 393 aaPredicted RBP11.17□□□□□ -0.62
RPL28-201ENST00000344063 FAR2Q96K12 515 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 APOL2Q9BQE5 337 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 ZDHHC18Q9NUE0 388 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 DDIT4Q9NX09 232 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
RPL28-201ENST00000344063 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 A0A087WZ62 844 aa11.17□□□□□ -0.62
RPL28-201ENST00000344063 UBA6A0AVT1 1052 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms