RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 F8W031 263 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 PARNO95453 639 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 FTLP02792 175 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 UQCRBP14927 111 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PTPN6P29350 595 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 HNF4AP41235 474 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 RBBP4Q09028 425 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 IDI1Q13907 227 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 VEPH1Q14D04 833 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CHRNA2Q15822 529 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 FAM76BQ5HYJ3 339 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TCEAL6Q6IPX3 200 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 RAB2BQ8WUD1 216 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 RACGAP1Q9H0H5 632 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 DOCK4Q8N1I0 1966 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TESPA1A2RU30 521 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 PSMD12O00232 456 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 NFICP08651 508 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SERPINF2P08697 491 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SPARCP09486 303 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 GNA15P30679 374 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 HSD17B4P51659 736 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 RAD51Q06609 339 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CHRNDQ07001 517 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ARPINQ7Z6K5 226 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PCDH19Q8TAB3 1148 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 EEF1AKMT1Q8WVE0 214 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CCDC177Q9NQR7 707 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 LATS2Q9NRM7 1088 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 UPB1Q9UBR1 384 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 GTF3C4Q9UKN8 822 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TET3O43151 1660 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 GBF1Q92538 1859 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ZDBF2Q9HCK1 2354 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 FAM240BA0A1B0GVZ2 78 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 RGS14O43566 566 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ZNF432O94892 652 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 YES1P07947 543 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 NUDT7P0C024 238 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ZNF3P17036 446 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 KCNH2Q12809 1159 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 DGKDQ16760 1214 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 XAGE2Q96GT9 111 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 PHF12Q96QT6 1004 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 CAMKK2Q96RR4 588 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 EHD4Q9H223 541 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SLC35C2Q9NQQ7 365 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SLC5A4Q9NY91 659 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 BARX2Q9UMQ3 279 aaPredicted RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 AATKQ6ZMQ8 1374 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 WDR7Q9Y4E6 1490 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 TSPAN1O60635 241 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ZBED4O75132 1171 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 P4HBP07237 508 aaKnown RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 NCAM1P13591 858 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 MYL9P24844 172 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ZAP70P43403 619 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 GSTM5P46439 218 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 PDPK2PQ6A1A2 396 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 JAMLQ86YT9 394 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ATPAF2Q8N5M1 289 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SLC35G2Q8TBE7 412 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 CNKSR1Q969H4 720 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 EMILIN3Q9NT22 766 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 AASSQ9UDR5 926 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SSR3Q9UNL2 185 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 KIF28PB7ZC32 967 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 NDUFB5O43674 189 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 RFC4P35249 363 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 PCID2Q5JVF3 399 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 THAP5Q7Z6K1 395 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 TMEM132CQ8N3T6 1108 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 HPS3Q969F9 1004 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 AIFM3Q96NN9 605 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 WDR11Q9BZH6 1224 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 RIBC2Q9H4K1 309 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 VPS45Q9NRW7 570 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SPATA7Q9P0W8 599 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
VCAN-203ENST00000343200 EML5Q05BV3 1969 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 TTC26A0AVF1 554 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 CD58P19256 250 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 IL18R1Q13478 541 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 SH3D19Q5HYK7 790 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 GUF1Q8N442 669 aaKnown RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 TMEM35BQ8NCS4 154 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 ASB15Q8WXK1 588 aa6.3□□□□□ -1.4
VCAN-203ENST00000343200 C12orf43Q96C57 262 aaKnown RBP6.3□□□□□ -1.4
VCAN-203ENST00000343200 DCUN1D1Q96GG9 259 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms