RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SMIM31A0A1B0GVY4 71 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 KRT8P05787 483 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 THRAP10827 490 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 IMPDH2P12268 514 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PSMC3P17980 439 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SLC1A6P48664 564 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HSPA13P48723 471 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 GEMP55040 296 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CRADDP78560 199 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 POU4F1Q01851 419 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CNPY1Q3B7I2 92 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 LIN52Q52LA3 116 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FBXO47Q5MNV8 452 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 AGAP9Q5VTM2 703 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PLEKHA7Q6IQ23 1121 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PTAR1Q7Z6K3 402 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 RAET1EQ8TD07 263 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 P2RX7Q99572 595 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CYP3A43Q9HB55 503 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HPS4Q9NQG7 708 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PRRG1O14668 218 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ADAMTS3O15072 1205 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 TIMM44O43615 452 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 DEAF1O75398 565 aaPredicted RBP8.27□□□□□ -1.08
UBE4B-202ENST00000343090 CYP1A2P05177 515 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 SERPIND1P05546 499 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ANPEPP15144 967 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 TNFSF9P41273 254 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 CPT1AP50416 773 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 NUP107P57740 925 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 LRRC74AQ0VAA2 488 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 TDRD10Q5VZ19 366 aaKnown RBP8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 BNC2Q6ZN30 1099 aaPredicted RBP8.27□□□□□ -1.08
UBE4B-202ENST00000343090 SETD3Q86TU7 594 aaPredicted RBP8.27□□□□□ -1.08
UBE4B-202ENST00000343090 FAM71AQ8IYT1 594 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF786Q8N393 782 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 TMEM161BQ8NDZ6 487 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 APOPT1Q96IL0 206 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ATXN3LQ9H3M9 355 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ERVK-5Q9HDB9 667 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 GIMAP4Q9NUV9 329 aa8.27□□□□□ -1.08
UBE4B-202ENST00000343090 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 CELF2O95319 508 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 EFEMP1Q12805 493 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DPYSL3Q14195 570 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 EML3Q32P44 896 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SYTL3Q4VX76 610 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 TTC23LQ6PF05 361 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PIGWQ7Z7B1 504 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DDX53Q86TM3 631 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PYDC1Q8WXC3 89 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 OTULINQ96BN8 352 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HES6Q96HZ4 224 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 VCPIP1Q96JH7 1222 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PREBQ9HCU5 417 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 NT5MQ9NPB1 228 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ASMTLO95671 621 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 LYNP07948 512 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PAEPP09466 180 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ITGB5P18084 799 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PPP3CCP48454 512 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HUNKP57058 714 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 RPL7AP62424 266 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 MGAT5Q09328 741 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DMC1Q14565 340 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PDK3Q15120 406 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 KCNT2Q6UVM3 1135 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ERO1BQ86YB8 467 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 TAGAPQ8N103 731 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DNERQ8NFT8 737 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DNAJB3Q8WWF6 145 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PHF21BQ96EK2 531 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SLITRK1Q96PX8 696 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 CINPQ9BW66 212 aaPredicted RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 NCANO14594 1321 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 TNFAIP8O95379 198 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 APOA4P06727 396 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC159P0C7I6 412 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 RAG1P15918 1043 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 GLRA2P23416 452 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 KDELR1P24390 212 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HARS2P49590 506 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 GTF2BQ00403 316 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SLC45A4Q5BKX6 768 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 REPS2Q8NFH8 660 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 SLC2A14Q8TDB8 520 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms