RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NETO2Q8NC67 525 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 CCDC110Q8TBZ0 833 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 SERPINB12Q96P63 405 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 PGLYRP2Q96PD5 576 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 TMEM175Q9BSA9 504 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 CRISPLD2Q9H0B8 497 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 TKTL2Q9H0I9 626 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 RAB6BQ9NRW1 208 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 PCDHB5Q9Y5E4 795 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 A0A087WUV0 522 aaPredicted RBP20.67■□□□□ 0.9
RTN1-202ENST00000342503 OR6C75A6NL08 312 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 HACD1B0YJ81 288 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 CHADO15335 359 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 TCEA3O75764 348 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 PARNO95453 639 aaKnown RBP20.67■□□□□ 0.9
RTN1-202ENST00000342503 GALTP07902 379 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 PBX3P40426 434 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 PGFP49763 221 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 PAFAH1B3Q15102 231 aaKnown RBP20.67■□□□□ 0.9
RTN1-202ENST00000342503 DDR2Q16832 855 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 TNFAIP8L3Q5GJ75 292 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 ZNF280DQ6N043 979 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 SCD5Q86SK9 330 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 STKLD1Q8NE28 680 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 TFB1MQ8WVM0 346 aaKnown RBP20.67■□□□□ 0.9
RTN1-202ENST00000342503 C8orf48Q96LL4 319 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 TOX2Q96NM4 488 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 ABCC13Q9NSE7 274 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 SNX10Q9Y5X0 201 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 SF3B1O75533 1304 aaKnown RBP eCLIP20.67■□□□□ 0.9
RTN1-202ENST00000342503 DCLK1O15075 740 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 EIF3HO15372 352 aaKnown RBP eCLIP20.67■□□□□ 0.9
RTN1-202ENST00000342503 GCATO75600 419 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 VAV1P15498 845 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 GUCY1A3Q02108 690 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 STAT4Q14765 748 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 SYCP2LQ5T4T6 812 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 VSTM1Q6UX27 236 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 CCDC77Q9BR77 488 aa20.67■□□□□ 0.9
RTN1-202ENST00000342503 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
RTN1-202ENST00000342503 E7ESA3 106 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 TRIM66O15016 1216 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 ERCC2P18074 760 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 MDH1P40925 334 aaKnown RBP20.66■□□□□ 0.9
RTN1-202ENST00000342503 HCAR3P49019 387 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 ARPP19P56211 112 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 TPI1P60174 286 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 PPARDQ03181 441 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 FAXCQ5TGI0 409 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 HEATR6Q6AI08 1181 aaKnown RBP20.66■□□□□ 0.9
RTN1-202ENST00000342503 C4orf22Q6V702 233 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.66■□□□□ 0.9
RTN1-202ENST00000342503 NUP93Q8N1F7 819 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 RNF34Q969K3 372 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 VPS37BQ9H9H4 285 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 NMUR1Q9HB89 426 aa20.66■□□□□ 0.9
RTN1-202ENST00000342503 ZMYND8Q9ULU4 1186 aaPredicted RBP20.66■□□□□ 0.9
RTN1-202ENST00000342503 A0A1W2PQH9 124 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 C5orf60A6NFR6 353 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 ERICH4A6NGS2 130 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 A6NNZ2 444 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 IVLP07476 585 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 MAGEA11P43364 429 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 EIF4EBP2Q13542 120 aaPredicted RBP20.65■□□□□ 0.9
RTN1-202ENST00000342503 BBS9Q3SYG4 887 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 TUBB8Q3ZCM7 444 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 CAPN12Q6ZSI9 719 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 TMEM173Q86WV6 379 aaPredicted RBP20.65■□□□□ 0.9
RTN1-202ENST00000342503 PDIK1LQ8N165 341 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 DIS3LQ8TF46 1054 aaKnown RBP20.65■□□□□ 0.9
RTN1-202ENST00000342503 BCL7CQ8WUZ0 217 aaPredicted RBP20.65■□□□□ 0.9
RTN1-202ENST00000342503 HTR3CQ8WXA8 447 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 LGMNQ99538 433 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 WDR83Q9BRX9 315 aaKnown RBP20.65■□□□□ 0.9
RTN1-202ENST00000342503 KLC2Q9H0B6 622 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 ETNK1Q9HBU6 452 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 CTNNAL1Q9UBT7 734 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 SLC12A6Q9UHW9 1150 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 NR2E3Q9Y5X4 410 aa20.65■□□□□ 0.9
RTN1-202ENST00000342503 IRAK2O43187 625 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 UPP2O95045 317 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 METTL18O95568 372 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 GPX6P59796 221 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 ELAVL2Q12926 359 aaKnown RBP20.64■□□□□ 0.9
RTN1-202ENST00000342503 PRKD1Q15139 912 aaPredicted RBP20.64■□□□□ 0.9
RTN1-202ENST00000342503 RTP2Q5QGT7 225 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 RSPO2Q6UXX9 243 aaPredicted RBP20.64■□□□□ 0.9
RTN1-202ENST00000342503 LRRC31Q6UY01 552 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 LEKR1Q6ZMV7 388 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 TAS1R1Q7RTX1 841 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 LRRC43Q8N309 656 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 TTC9BQ8N6N2 239 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 ATAD1Q8NBU5 361 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 PYROXD1Q8WU10 500 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 SFMBT1Q9UHJ3 866 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 SCML2Q9UQR0 700 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 ATP11BQ9Y2G3 1177 aa20.64■□□□□ 0.9
RTN1-202ENST00000342503 CLUHO75153 1309 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 MAGEA6P43360 314 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms