RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SEL1L3Q68CR1 1132 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 UBA2Q9UBT2 640 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-202ENST00000342494 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 PGK1P00558 417 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 HSD17B3P37058 310 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SCNN1GP51170 649 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 NOGQ13253 232 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SCUBE3Q8IX30 993 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 MICU2Q8IYU8 434 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SENP8Q96LD8 212 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SMAD5Q99717 465 aaKnown RBP15.38■□□□□ 0.05
UBE3B-202ENST00000342494 USP20Q9Y2K6 914 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CCL23P55773 120 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 DDR1Q08345 913 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CCNG2Q16589 344 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CAMKK1Q8N5S9 505 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SPACA7Q96KW9 195 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 PAFAH2Q99487 392 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 OSGEPQ9NPF4 335 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SERPINI2O75830 405 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CD151P48509 253 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CDH8P55286 799 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 CHRNB3Q05901 458 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 NR6A1Q15406 480 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SETMARQ53H47 684 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-202ENST00000342494 RGMBQ6NW40 437 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 THRAP10827 490 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 TPH1P17752 444 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 PPP2R1BP30154 601 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 MLH1P40692 756 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 XRCC4Q13426 336 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 GLT6D1Q7Z4J2 308 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 PPP1R16AQ96I34 528 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 OMDQ99983 421 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 ARMC7Q9H6L4 198 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 KLHL28Q9NXS3 571 aa15.38■□□□□ 0.05
UBE3B-202ENST00000342494 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 RNF103O00237 685 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 IRF6O14896 467 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 ANGPT1Q15389 498 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 USP39Q53GS9 565 aaKnown RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 CCDC81Q6ZN84 652 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 ZNF571Q7Z3V5 609 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 SLC22A9Q8IVM8 553 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 MCOLN2Q8IZK6 566 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PARVBQ9HBI1 364 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 MARCH2Q9P0N8 246 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 SNX8Q9Y5X2 465 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 TMEM114B3SHH9 223 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 CCDC130P13994 396 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 UBA1P22314 1058 aaKnown RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 LSP1P33241 339 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 FIGNQ5HY92 759 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 CATSPERGQ6ZRH7 1159 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 VN1R5Q7Z5H4 357 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 MCOLN3Q8TDD5 553 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PPP1R10Q96QC0 940 aaKnown RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PRKD2Q9BZL6 878 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 M0R3G1 203 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 RAD51BO15315 384 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 NDUFS2O75306 463 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PAEPP09466 180 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 YBX3P16989 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PRAMEF19Q5SWL8 479 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 ARMC12Q5T9G4 340 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 FIBCD1Q8N539 461 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 RIN3Q8TB24 985 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 CASKIN2Q8WXE0 1202 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 EVA1BQ9NVM1 165 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 LTFP02788 710 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 ATP5C1P36542 298 aaKnown RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PKN1Q16512 942 aa15.37■□□□□ 0.05
UBE3B-202ENST00000342494 CAB39Q9Y376 341 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-202ENST00000342494 PLSCR1O15162 318 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 AMPD1P23109 780 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 POU1F1P28069 291 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CELF3Q5SZQ8 465 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 EPS8L3Q8TE67 593 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 LENG9Q96B70 501 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SH3GL1Q99961 368 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 POPDC2Q9HBU9 364 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SYBUQ9NX95 663 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SH3BP4Q9P0V3 963 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 TRHDEQ9UKU6 1024 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 RAB23Q9ULC3 237 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 MRPS23Q9Y3D9 190 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 DCCP43146 1447 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 USP1O94782 785 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CPA3P15088 417 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SKP1P63208 163 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZCCHC8Q6NZY4 707 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CAAP1Q9H8G2 361 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms