RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HSPBP1Q9NZL4 362 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 IPO11Q9UI26 975 aaKnown RBP19.05■□□□□ 0.64
SMPD1-201ENST00000342245 CDK5RAP2Q96SN8 1893 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 C7orf72A4D263 438 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 PRKCHP24723 683 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 CNTFP26441 200 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 IREB2P48200 963 aaKnown RBP19.05■□□□□ 0.64
SMPD1-201ENST00000342245 TIFABQ6ZNK6 161 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 SIX6OS1Q8N1H7 587 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 PCIF1Q9H4Z3 704 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-201ENST00000342245 TRIM64A6NGJ6 449 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 GPR25O00155 361 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 PARNO95453 639 aaKnown RBP19.04■□□□□ 0.64
SMPD1-201ENST00000342245 HSD17B4P51659 736 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
SMPD1-201ENST00000342245 CEP55Q53EZ4 464 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 XKR5Q6UX68 686 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 USP37Q86T82 979 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 PHF13Q86YI8 300 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-201ENST00000342245 FBXL13Q8NEE6 735 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 SEMA4DQ92854 862 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 CLIP3Q96DZ5 547 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 TUBA1CQ9BQE3 449 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 SHCBP1LQ9BZQ2 653 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 BCS1LQ9Y276 419 aa19.04■□□□□ 0.64
SMPD1-201ENST00000342245 RGSL1A5PLK6 1076 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 MSH4O15457 936 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 CDKN2BP42772 138 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 NUDT2P50583 147 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 PSMC1P62191 440 aaKnown RBP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 FAXCQ5TGI0 409 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 PGAM4Q8N0Y7 254 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 COQ10BQ9H8M1 238 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 CDC14AQ9UNH5 594 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 LOXHD1Q8IVV2 1947 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 K7ENM7 598 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 DCXO43602 365 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 EPHA3P29320 983 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 SREBF1P36956 1147 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 THOP1P52888 689 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 CTBSQ01459 385 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 GRSF1Q12849 480 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 ITGADQ13349 1161 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 AOC3Q16853 763 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 ABCB5Q2M3G0 1257 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 LSM12Q3MHD2 195 aaKnown RBP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 AGAP7PQ5VUJ5 663 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 ITIH5Q86UX2 942 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 IGDCC3Q8IVU1 814 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 RP9Q8TA86 221 aaKnown RBP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 ACMSDQ8TDX5 336 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 TOP1MTQ969P6 601 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 CDRT15Q96T59 188 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 NPLQ9BXD5 320 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 MOV10Q9HCE1 1003 aaKnown RBP19.03■□□□□ 0.64
SMPD1-201ENST00000342245 XPNPEP1Q9NQW7 623 aa19.03■□□□□ 0.64
SMPD1-201ENST00000342245 ANKRD34BA5PLL1 514 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 XRCC1P18887 633 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 KLRK1P26718 216 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ADSLP30566 484 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 KPNA1P52294 538 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ZCCHC23Q6ZST2 131 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 MCF2L2Q86YR7 1114 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 DSELQ8IZU8 1212 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ATP6V0D2Q8N8Y2 350 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 CCDC127Q96BQ5 260 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 CNDP1Q96KN2 507 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 KLHL11Q9NVR0 708 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 DAPK2Q9UIK4 370 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ZNF839A8K0R7 811 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 NOP56O00567 594 aaKnown RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 GCATO75600 419 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 RSL1D1O76021 490 aaKnown RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 FGF3P11487 239 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 GNL1P36915 607 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 GALNT2Q10471 571 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 RFTN1Q14699 578 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 NRF1Q16656 503 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 MAVSQ7Z434 540 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 LRRC47Q8N1G4 583 aaKnown RBP19.02■□□□□ 0.64
SMPD1-201ENST00000342245 PHTF2Q8N3S3 785 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 SLC15A4Q8N697 577 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ANKK1Q8NFD2 765 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 TMC2Q8TDI7 906 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 ATP2A3Q93084 1043 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 GPRC5DQ9NZD1 345 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 CDY2AQ9Y6F7 541 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 CDY1Q9Y6F8 540 aa19.02■□□□□ 0.64
SMPD1-201ENST00000342245 TAF1P21675 1872 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 A0A1W2PPW3 197 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 USP17L10C9JJH3 530 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF195O14628 629 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 FOXD2O60548 495 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 C1QAP02745 245 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 GABRB3P28472 473 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 NUMBP49757 651 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 CD300CQ08708 224 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 DMPKQ09013 629 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms