RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 GOLGA6L7A0A1B0GV03 622 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 CES2O00748 559 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 PAGE1O75459 146 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 AMPD1P23109 780 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 CCDC149Q6ZUS6 474 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 GRASPQ7Z6J2 395 aaPredicted RBP14.4□□□□□ -0.1
PMS1-201ENST00000342075 MYRIPQ8NFW9 859 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
PMS1-201ENST00000342075 RBM41Q96IZ5 413 aaKnown RBP14.4□□□□□ -0.1
PMS1-201ENST00000342075 TTYH1Q9H313 450 aaPredicted RBP14.4□□□□□ -0.1
PMS1-201ENST00000342075 ATXN3LQ9H3M9 355 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 ZNF576Q9H609 170 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 AMACRQ9UHK6 382 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 TRDMT1O14717 391 aaKnown RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 TBX4P57082 545 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 CKAP4Q07065 602 aaKnown RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 DPYSL2Q16555 572 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 C1orf228Q6PIY5 440 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 C14orf80Q86SX3 495 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 CSPG4P5Q96PW8 444 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 SOX1O00570 391 aaPredicted RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 GLP2RO95838 553 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 OAS1P00973 400 aaKnown RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 UQCRHP07919 91 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 DESP17661 470 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 RGS19P49795 217 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 TRADDQ15628 312 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 HECTD3Q5T447 861 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 ARTNQ5T4W7 220 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 PIK3R6Q5UE93 754 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 MSANTD2Q6P1R3 559 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 ZNF707Q96C28 371 aaPredicted RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 SERPINB11Q96P15 392 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 TTC7AQ9ULT0 858 aaPredicted RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 CBX2Q14781 532 aaPredicted RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 TCEAL5Q5H9L2 206 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 CIR1Q86X95 450 aaPredicted RBP14.39□□□□□ -0.11
PMS1-201ENST00000342075 ARHGAP18Q8N392 663 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 SLC39A13Q96H72 371 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 OR12D3Q9UGF7 316 aa14.39□□□□□ -0.11
PMS1-201ENST00000342075 RHOP08100 348 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 CCR1P32246 355 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ATP5C1P36542 298 aaKnown RBP14.38□□□□□ -0.11
PMS1-201ENST00000342075 TERF1P54274 439 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 DUSP6Q16828 381 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 SND1Q7KZF4 910 aaKnown RBP eCLIP14.38□□□□□ -0.11
PMS1-201ENST00000342075 BEND5Q7L4P6 421 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
PMS1-201ENST00000342075 RIN3Q8TB24 985 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ASAH2Q9NR71 780 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ARHGEF38Q9NXL2 777 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 CCL26Q9Y258 94 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 TLR6Q9Y2C9 796 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 HEY1Q9Y5J3 304 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 HS3ST4Q9Y661 456 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 MOSPD3O75425 235 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 LRIG2O94898 1065 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 KLKB1P03952 638 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 GBE1Q04446 702 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 GRIN2CQ14957 1233 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ITIH5Q86UX2 942 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 SHKBP1Q8TBC3 707 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 LRCH3Q96II8 777 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 ZFRQ96KR1 1074 aaKnown RBP14.38□□□□□ -0.11
PMS1-201ENST00000342075 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 NDFIP2Q9NV92 336 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 MPP6Q9NZW5 540 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 NEU3Q9UQ49 428 aa14.38□□□□□ -0.11
PMS1-201ENST00000342075 MYOFQ9NZM1 2061 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 RAD51CO43502 376 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 GBP1P32455 592 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 PSEN1P49768 467 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 SLC10A2Q12908 348 aaPredicted RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 TUBB2AQ13885 445 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 TEAD2Q15562 447 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 TAZQ16635 292 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 NADSYN1Q6IA69 706 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 RFWD3Q6PCD5 774 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 PNKPQ96T60 521 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 TRIM51Q9BSJ1 452 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 TUBB2BQ9BVA1 445 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 ARHGEF4Q9NR80 690 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 DMGDHQ9UI17 866 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 DNPEPQ9ULA0 475 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 TTI1O43156 1089 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 F9P00740 461 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 MBL2P11226 248 aaPredicted RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 SMAD3P84022 425 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms