RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 VWA3BQ502W6 1294 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 CT47A1Q5JQC4 288 aaPredicted RBP20.99■□□□□ 0.95
SYNE2-201ENST00000341472 BEND5Q7L4P6 421 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 CYP2U1Q7Z449 544 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 TMEFF1Q8IYR6 380 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 SHC3Q92529 594 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 PIGKQ92643 395 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 ERLEC1Q96DZ1 483 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 TRIM62Q9BVG3 475 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 NDST4Q9H3R1 872 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 RXFP3Q9NSD7 469 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 CALCOCO1Q9P1Z2 691 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 DNAJC12Q9UKB3 198 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 NAALADL1Q9UQQ1 740 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 NCOR2Q9Y618 2525 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 MED19A0JLT2 244 aaPredicted RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 CAPN9O14815 690 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 KHNYNO15037 678 aaKnown RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 ACSL4O60488 711 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 ZNF217O75362 1048 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 IGLV3-27P01718 113 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 PRKCSHP14314 528 aaPredicted RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 LIMK1P53667 647 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 PTK2Q05397 1052 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 STARD3Q14849 445 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 EIF4HQ15056 248 aaKnown RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 SPDYCQ5MJ68 293 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 IL31Q6EBC2 164 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 SLC36A4Q6YBV0 504 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 DQX1Q8TE96 717 aaKnown RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 DDX50Q9BQ39 737 aaKnown RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 TUBGCP2Q9BSJ2 902 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 IRX2Q9BZI1 471 aaPredicted RBP20.98■□□□□ 0.95
SYNE2-201ENST00000341472 CIPCQ9C0C6 399 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 CD248Q9HCU0 757 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 CYTH4Q9UIA0 394 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 SPTBN2O15020 2390 aa20.98■□□□□ 0.95
SYNE2-201ENST00000341472 GOLGA6L7A0A1B0GV03 622 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 FOXN3O00409 490 aaPredicted RBP20.97■□□□□ 0.95
SYNE2-201ENST00000341472 PAPSS1O43252 624 aaPredicted RBP20.97■□□□□ 0.95
SYNE2-201ENST00000341472 SYNCRIPO60506 623 aaKnown RBP20.97■□□□□ 0.95
SYNE2-201ENST00000341472 NDUFV2P19404 249 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 HOXD9P28356 352 aaPredicted RBP20.97■□□□□ 0.95
SYNE2-201ENST00000341472 ARID5AQ03989 594 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 STPG1Q5TH74 334 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 TCEAL6Q6IPX3 200 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 TCEAL3Q969E4 200 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 SERPINB11Q96P15 392 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 SIX2Q9NPC8 291 aa20.97■□□□□ 0.95
SYNE2-201ENST00000341472 E5RJQ4 531 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 IRAK2O43187 625 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 IL12RB1P42701 662 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 PTGER3P43115 390 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 YWHAZP63104 245 aaKnown RBP20.96■□□□□ 0.95
SYNE2-201ENST00000341472 HSP90AA4PQ58FG1 418 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 MPP7Q5T2T1 576 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 PIK3R6Q5UE93 754 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 RFWD3Q6PCD5 774 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 WDTC1Q8N5D0 677 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 WFIKKN2Q8TEU8 576 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 SORCS1Q8WY21 1168 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 DDX1Q92499 740 aaKnown RBP20.96■□□□□ 0.95
SYNE2-201ENST00000341472 MRGPRX1Q96LB2 322 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 TLR6Q9Y2C9 796 aa20.96■□□□□ 0.95
SYNE2-201ENST00000341472 PES1O00541 588 aaKnown RBP20.95■□□□□ 0.94
SYNE2-201ENST00000341472 AP5Z1O43299 807 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 TBL1XO60907 577 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 KRT9P35527 623 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 RPL6Q02878 288 aaKnown RBP20.95■□□□□ 0.94
SYNE2-201ENST00000341472 PDCLQ13371 301 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 NNTQ13423 1086 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 ENPP2Q13822 863 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 ZNF234Q14588 700 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 FUT11Q495W5 492 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 SYPL2Q5VXT5 272 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 LYSMD4Q5XG99 296 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 TMEM215Q68D42 235 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 RNF43Q68DV7 783 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 KIAA1324Q6UXG2 1013 aaKnown RBP20.95■□□□□ 0.94
SYNE2-201ENST00000341472 ARMCX6Q7L4S7 300 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 ADAM32Q8TC27 787 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 SLC39A13Q96H72 371 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 PPP1R13BQ96KQ4 1090 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 FCRL2Q96LA5 508 aaPredicted RBP20.95■□□□□ 0.94
SYNE2-201ENST00000341472 GBP4Q96PP9 640 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 LHX5Q9H2C1 402 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 POPDC2Q9HBU9 364 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 SAMSN1Q9NSI8 373 aaKnown RBP20.95■□□□□ 0.94
SYNE2-201ENST00000341472 PCDHGC3Q9UN70 934 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 PLA2G4CQ9UP65 541 aa20.95■□□□□ 0.94
SYNE2-201ENST00000341472 IGHV1OR15-9A0A0B4J2B8 117 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 KCNJ18B7U540 433 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 HLA-FP30511 346 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 DPP6P42658 865 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 SNX16P57768 344 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 BPIFB4P59827 614 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 KCNJ12Q14500 433 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 FAM133BQ5BKY9 247 aaKnown RBP20.94■□□□□ 0.94
SYNE2-201ENST00000341472 MIIPQ5JXC2 388 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 TAC4Q86UU9 113 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms