RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 VPS26AO75436 327 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 RBP1P09455 135 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 OVGP1Q12889 678 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 CYB5D1Q6P9G0 228 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 PLPPR4Q7Z2D5 763 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF556Q9HAH1 456 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 UMODL1Q5DID0 1318 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 LTBP4Q8N2S1 1624 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 LTN1O94822 1766 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 EML1O00423 815 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 PTPN7P35236 360 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 PRKCIP41743 596 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 NR2C2P49116 596 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 MRPS35P82673 323 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 EMC1Q8N766 993 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 AENQ8WTP8 325 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 RNF112Q9ULX5 631 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 EIF3LQ9Y262 564 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 H3BQF6 201 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 KDM1AO60341 852 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 KRT34O76011 436 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 MPOP05164 745 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 CALB2P22676 271 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TKTL1P51854 596 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 OXCT1P55809 520 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 MGAT5Q09328 741 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 C1orf186Q6ZWK4 172 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 SCTRP47872 440 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 LRRC36Q1X8D7 754 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 TMC3Q7Z5M5 1100 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 EIF4E1BA6NMX2 242 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 EVPLLA8MZ36 301 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 MICAL2O94851 1124 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 NUDT2P50583 147 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 PABPC1LQ4VXU2 614 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 STRA8Q7Z7C7 330 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SMG7Q92540 1137 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 WWOXQ9NZC7 414 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 DGKIO75912 1065 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CRTAMO95727 393 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 PPP3CCP48454 512 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 NDST1P52848 882 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 PSMD5Q16401 504 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 ZC3H12BQ5HYM0 836 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CYGBQ8WWM9 190 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 ZSCAN9O15535 394 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SPATA31D3P0C874 917 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 HNRNPH1P31943 449 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CPA2P48052 419 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 SPATA31D4Q6ZUB0 917 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 ERLEC1Q96DZ1 483 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 EFCAB1Q9HAE3 211 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
DNMT1-201ENST00000340748 PYGMP11217 842 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 CACHD1Q5VU97 1274 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
DNMT1-201ENST00000340748 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 BTNL10A8MVZ5 291 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 HACD1B0YJ81 288 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 RECQL4O94761 1208 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SUPT7LO94864 414 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 PCDH8O95206 1070 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms