RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 LRRC14Q15048 493 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SLC25A52Q3SY17 297 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 RAP1GAP2Q684P5 730 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 LGI2Q8N0V4 545 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 CARNMT1Q8N4J0 409 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 DQX1Q8TE96 717 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 PYROXD1Q8WU10 500 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SNF8Q96H20 258 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 HES6Q96HZ4 224 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 TRDMT1O14717 391 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 BEST1O76090 585 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 PHBP35232 272 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SMAD3P84022 425 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 HFE2Q6ZVN8 426 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 POF1BQ8WVV4 589 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 TOP1MTQ969P6 601 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 DNMT3LQ9UJW3 386 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 PER2O15055 1255 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 ENDOD1O94919 500 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SOD2P04179 222 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SAT1P21673 171 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 IGFBP6P24592 240 aaPredicted RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SESN2P58004 480 aaPredicted RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 COLGALT1Q8NBJ5 622 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 TFB1MQ8WVM0 346 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 CASKIN2Q8WXE0 1202 aa12.13□□□□□ -0.47
C2orf88-201ENST00000340623 CDK5RAP1Q96SZ6 601 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 AFF4Q9UHB7 1163 aaKnown RBP12.13□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 C2CD4BA6NLJ0 364 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ZBTB24O43167 697 aaPredicted RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 NNMTP40261 264 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 KPNA1P52294 538 aaPredicted RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ARL4CP56559 192 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 COPS2P61201 443 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 SATB1Q01826 763 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 SYPL2Q5VXT5 272 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ITPRIPL1Q6GPH6 555 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 LRRC57Q8N9N7 239 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 PPP1R14CQ8TAE6 165 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 PIWIL1Q96J94 861 aaKnown RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 RWDD3Q9Y3V2 267 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 RLFQ13129 1914 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TRIM43BA6NCK2 446 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 KCNK1O00180 336 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TBX18O95935 607 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 GOT1P17174 413 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 GPR17Q13304 367 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 NPNTQ6UXI9 565 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TMEM110Q86TL2 294 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 DENND1CQ8IV53 801 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TRIM43Q96BQ3 446 aaPredicted RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TBC1D31Q96DN5 1066 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 PPM1FP49593 454 aaPredicted RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 CMTR2Q8IYT2 770 aaKnown RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 MMGT1Q8N4V1 131 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 DNPEPQ9ULA0 475 aa12.12□□□□□ -0.47
C2orf88-201ENST00000340623 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
C2orf88-201ENST00000340623 WDR91A4D1P6 747 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 JCHAINP01591 159 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 PCK1P35558 622 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
C2orf88-201ENST00000340623 PCSK7Q16549 785 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 TAC4Q86UU9 113 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 WDTC1Q8N5D0 677 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 GGT7Q9UJ14 662 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms