RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 COL11A1P12107 1806 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 A8MXQ7 604 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 TPP1O14773 563 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 OGTO15294 1046 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 SNNO75324 88 aaPredicted RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 ALDOAP04075 364 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 NCF2P19878 526 aaPredicted RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 GPD2P43304 727 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 CLCN3P51790 818 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 SESN2P58004 480 aaPredicted RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 AP2B1P63010 937 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 TAP1Q03518 808 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 GK3PQ14409 553 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 FBXL19Q6PCT2 694 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 RNF148Q8N7C7 305 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 RSAD1Q9HA92 442 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 PPME1Q9Y570 386 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 H0YCG3 227 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 PRPSAP2O60256 369 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 CCR10P46092 362 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 HIC1Q14526 733 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF667Q5HYK9 610 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 C10orf107Q8IVU9 208 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 AZIN2Q96A70 460 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 SIGLEC10Q96LC7 697 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 TUBB6Q9BUF5 446 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 SNRNP25Q9BV90 132 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
CCDC144CP-201ENST00000340196 E9PBE3 544 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 KLF11O14901 512 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 CHADO15335 359 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 KLHL41O60662 606 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 SIN3BO75182 1162 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 SERPINB6P35237 376 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 TRIP10Q15642 601 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 CCDC14Q49A88 953 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 TEDDM1Q5T9Z0 273 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 ATG16L1Q676U5 607 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 JADE1Q6IE81 842 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 FRMD7Q6ZUT3 714 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 DEFB107AQ8IZN7 70 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 PYROXD2Q8N2H3 581 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 FAM172AQ8WUF8 416 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 NMD3Q96D46 503 aaKnown RBP12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 CLMNQ96JQ2 1002 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 YIPF2Q9BWQ6 316 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 SOX13Q9UN79 622 aa12.33□□□□□ -0.43
CCDC144CP-201ENST00000340196 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 DCXO43602 365 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 FGF3P11487 239 aaPredicted RBP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 GPD1P21695 349 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 PRKCHP24723 683 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 STAT5BP51692 787 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 IGBP1P78318 339 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 AMHR2Q16671 573 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 MBLAC2Q68D91 279 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 DHDDSQ86SQ9 333 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 TP53INP2Q8IXH6 220 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 CPB2Q96IY4 423 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 GCNAQ96QF7 691 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 PCDH18Q9HCL0 1135 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 S100A14Q9HCY8 104 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 MAP3K20Q9NYL2 800 aaKnown RBP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 GPR25O00155 361 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 USP2O75604 605 aaPredicted RBP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 ARIH2O95376 493 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 TNNC2P02585 160 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 SERPINA6P08185 405 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 RAG1P15918 1043 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 CRABP2P29373 138 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 SLC1A6P48664 564 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZNF143P52747 638 aaPredicted RBP12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 MYBPC3Q14896 1274 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 EFHC1Q5JVL4 640 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 RABGAP1LQ5R372 815 aa12.33□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms