RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 DTLQ9NZJ0 730 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 PRKAG2Q9UGJ0 569 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 AFF4Q9UHB7 1163 aaKnown RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 SLC38A8A6NNN8 435 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 H7C0C1 242 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 EEF2KO00418 725 aaKnown RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 DCLK1O15075 740 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 MFSD11O43934 449 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 ZFXP17010 805 aaPredicted RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 ATP5OP48047 213 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 RPL10AP62906 217 aaKnown RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 ARL13BQ3SXY8 428 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 HIBCHQ6NVY1 386 aaPredicted RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 KRT222Q8N1A0 295 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 VPS52Q8N1B4 723 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 CCDC33Q8N5R6 958 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 ZNF461Q8TAF7 563 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 RSAD2Q8WXG1 361 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 ZIM3Q96PE6 472 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 DNALI1O14645 258 aaPredicted RBP21.93■■□□□ 1.1
VRK2-201ENST00000340157 RPL22P35268 128 aaKnown RBP21.93■■□□□ 1.1
VRK2-201ENST00000340157 UBAP2Q5T6F2 1119 aaKnown RBP21.93■■□□□ 1.1
VRK2-201ENST00000340157 ARHGAP18Q8N392 663 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 NETO2Q8NC67 525 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 PWWP2AQ96N64 755 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 OLFM3Q96PB7 478 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 TTLL2Q9BWV7 592 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 MTRF1LQ9UGC7 380 aaKnown RBP21.93■■□□□ 1.1
VRK2-201ENST00000340157 ANAPC5Q9UJX4 755 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 NEU3Q9UQ49 428 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 ATP8A1Q9Y2Q0 1164 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 NUP205Q92621 2012 aa21.93■■□□□ 1.1
VRK2-201ENST00000340157 GOLGA6BA6NDN3 693 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 ZDHHC11BP0C7U3 371 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 DNAJB2P25686 324 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 RTP4Q96DX8 246 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.92■■□□□ 1.1
VRK2-201ENST00000340157 COMMD8Q9NX08 183 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 OR12D3Q9UGF7 316 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 BCLAF3A2AJT9 711 aaKnown RBP21.92■■□□□ 1.1
VRK2-201ENST00000340157 LRIG2O94898 1065 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 SYF2O95926 243 aaKnown RBP21.92■■□□□ 1.1
VRK2-201ENST00000340157 TBX18O95935 607 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 URODP06132 367 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 SYN1P17600 705 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 RBL1P28749 1068 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 HCAR3P49019 387 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 NR2C2P49116 596 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 BRMS1LQ5PSV4 323 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 RNASEH2BQ5TBB1 312 aaKnown RBP21.92■■□□□ 1.1
VRK2-201ENST00000340157 ALS2CLQ60I27 953 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 TP53INP2Q8IXH6 220 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 RNF34Q969K3 372 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 CLIC5Q9NZA1 410 aa21.92■■□□□ 1.1
VRK2-201ENST00000340157 XPO7Q9UIA9 1087 aaKnown RBP21.92■■□□□ 1.1
VRK2-201ENST00000340157 KCNU1A8MYU2 1149 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 LILRB3O75022 631 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 FGF18O76093 207 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 RARGP13631 454 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 ERCC2P18074 760 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 STIP1P31948 543 aaKnown RBP21.91■■□□□ 1.1
VRK2-201ENST00000340157 PPM1AP35813 382 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 TUFMP49411 452 aaKnown RBP21.91■■□□□ 1.1
VRK2-201ENST00000340157 FAM193AP78312 1265 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 XRCC4Q13426 336 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 PAFAH1B3Q15102 231 aaKnown RBP21.91■■□□□ 1.1
VRK2-201ENST00000340157 TPGS2Q68CL5 300 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 FIBCD1Q8N539 461 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 BBOF1Q8ND07 529 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 CLP1Q92989 425 aaKnown RBP21.91■■□□□ 1.1
VRK2-201ENST00000340157 SLC39A13Q96H72 371 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 SERPINB11Q96P15 392 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 OSBPL2Q9H1P3 480 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 PRDM16Q9HAZ2 1276 aa21.91■■□□□ 1.1
VRK2-201ENST00000340157 FARP1Q9Y4F1 1045 aaPredicted RBP21.91■■□□□ 1.1
VRK2-201ENST00000340157 H0YGN5 161 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 CCR1P32246 355 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 TPI1P60174 286 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 CAV1Q03135 178 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 RAB33AQ14088 237 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 PPP2R5DQ14738 602 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 SLC45A4Q5BKX6 768 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 CFAP58Q5T655 872 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 FCRL2Q96LA5 508 aaPredicted RBP21.9■■□□□ 1.1
VRK2-201ENST00000340157 QKIQ96PU8 341 aaKnown RBP eCLIP21.9■■□□□ 1.11e-7■■■■■ 31.4
VRK2-201ENST00000340157 ZBP1Q9H171 429 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 ACBD3Q9H3P7 528 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 TLR8Q9NR97 1041 aaKnown RBP21.9■■□□□ 1.1
VRK2-201ENST00000340157 HSFX1Q9UBD0 423 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 TPX2Q9ULW0 747 aaKnown RBP21.9■■□□□ 1.1
VRK2-201ENST00000340157 MAGED2Q9UNF1 606 aaPredicted RBP21.9■■□□□ 1.1
VRK2-201ENST00000340157 NFS1Q9Y697 457 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 ANAPC1Q9H1A4 1944 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 CARNS1A5YM72 827 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 KCNN4O15554 427 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 PAGE1O75459 146 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 HMGA1P17096 107 aaKnown RBP21.9■■□□□ 1.1
VRK2-201ENST00000340157 PMS2P54278 862 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 NPWQ8N729 165 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 UBLCP1Q8WVY7 318 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms