RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 FAM72AQ5TYM5 149 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 KAZNQ674X7 775 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 SLC9A4Q6AI14 798 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 FAM72DQ6L9T8 149 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 BBS12Q6ZW61 710 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 FAM72BQ86X60 149 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PQLC3Q8N755 202 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 C12orf50Q8NA57 414 aaPredicted RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 VN1R2Q8NFZ6 395 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 MAIP1Q8WWC4 291 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 CSPG4P5Q96PW8 444 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 RASAL2Q9UJF2 1139 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 HBS1LQ9Y450 684 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 XIRP2A4UGR9 3374 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PAGE1O75459 146 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 SLC2A3P11169 496 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 GOT1P17174 413 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 CCR2P41597 374 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 NRIP1P48552 1158 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 KPNA1P52294 538 aaPredicted RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 TUBB4BP68371 445 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 LRIT3Q3SXY7 679 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 MIB1Q86YT6 1006 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 RNF34Q969K3 372 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 ZNF707Q96C28 371 aaPredicted RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 CDCA3Q99618 268 aaPredicted RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 LRRC19Q9H756 370 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 ASAH2Q9NR71 780 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 DNMT3BQ9UBC3 853 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 NEU3Q9UQ49 428 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 R3HDM2Q9Y2K5 976 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 C2orf16Q68DN1 1984 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 HELZP42694 1942 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 A0A1W2PPC1 479 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 SLC12A8A0AV02 714 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 CST8O60676 142 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PHF2O75151 1096 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 CDC25CP30307 473 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 HCAR3P49019 387 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 NRG1Q02297 640 aaPredicted RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 MANEALQ5VSG8 457 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PLD5Q8N7P1 536 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 C1orf74Q96LT6 269 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PRKD2Q9BZL6 878 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 DDX47Q9H0S4 455 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 ZNF576Q9H609 170 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 XPO7Q9UIA9 1087 aaKnown RBP8.11□□□□□ -1.11
TMC1-202ENST00000340019 DOCK4Q8N1I0 1966 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 MOSPD3O75425 235 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 PTPN2P17706 415 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 ZNF135P52742 658 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 DPYSQ14117 519 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 CCNG2Q16589 344 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 ERCC6LQ2NKX8 1250 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 LEMD2Q8NC56 503 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 SLC22A12Q96S37 553 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 KRT12Q99456 494 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 MAK16Q9BXY0 300 aaKnown RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 DCLK3Q9C098 648 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 OR12D3Q9UGF7 316 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 SNX10Q9Y5X0 201 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 HS3ST4Q9Y661 456 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 A0A1W2PRU2 124 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 H3BRJ5 948 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 APOC4-APOC2K7ER74 178 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 CREB3O43889 395 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 LRIG2O94898 1065 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 FGF19O95750 216 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 APOC2P02655 101 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 PFKLP17858 780 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 HOXC13P31276 330 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 CHRNA3P32297 505 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 ARL4AP40617 200 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 KCNQ1P51787 676 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 MLLT6P55198 1093 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 COG7P83436 770 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 CYP4F8P98187 520 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 MTA1Q13330 715 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 TFDP2Q14188 446 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 NAA30Q147X3 362 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 PRSS36Q5K4E3 855 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 TXNDC8Q6A555 127 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 TTC27Q6P3X3 843 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 DRICH1Q6PGQ1 229 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 RFX8Q6ZV50 586 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 RFX6Q8HWS3 928 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 KLHL7Q8IXQ5 586 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 ZNF683Q8IZ20 524 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 C1orf54Q8WWF1 131 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms