RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 KYAT3Q6YP21 454 aaKnown RBP9.56□□□□□ -0.88
RPGR-202ENST00000339363 CPNE9Q8IYJ1 553 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 ACTRT2Q8TDY3 377 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 TMA16Q96EY4 203 aaKnown RBP9.56□□□□□ -0.88
RPGR-202ENST00000339363 ZNF512Q96ME7 567 aaPredicted RBP9.56□□□□□ -0.88
RPGR-202ENST00000339363 LXNQ9BS40 222 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 ZNF696Q9H7X3 374 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 PLEKHA5Q9HAU0 1116 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 RAB20Q9NX57 234 aa9.56□□□□□ -0.88
RPGR-202ENST00000339363 ZNF219Q9P2Y4 722 aaPredicted RBP9.56□□□□□ -0.88
RPGR-202ENST00000339363 GREB1LQ9C091 1923 aaPredicted RBP9.56□□□□□ -0.88
RPGR-202ENST00000339363 AQP9O43315 295 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 H6PDO95479 791 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 GH2P01242 217 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 ABHD2P08910 425 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 GFAPP14136 432 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 ITGB5P18084 799 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CROCCQ5TZA2 2017 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 PLA2G4FQ68DD2 849 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 TTC30AQ86WT1 665 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CLIP4Q8N3C7 705 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 BHLHE22Q8NFJ8 381 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CDRT15Q96T59 188 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 MTG1Q9BT17 334 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 FRMD8Q9BZ67 464 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 ERVK-11Q9UQG0 969 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 H3BNX3 289 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 DENRO43583 198 aaKnown RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 ASNA1O43681 348 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FBXO21O94952 628 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 TGDSO95455 350 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CYP11B1P15538 503 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SERPINB5P36952 375 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SLC1A1P43005 524 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CLK3P49761 638 aaKnown RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 PEX3P56589 373 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SNAPC2Q13487 334 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SMU1Q2TAY7 513 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 GPATCH4Q5T3I0 446 aaKnown RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 CES4AQ5XG92 561 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FBXO36Q8NEA4 188 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 LRRN4Q8WUT4 740 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FOXP3Q9BZS1 431 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 VPS45Q9NRW7 570 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPGR-202ENST00000339363 SPEF1Q9Y4P9 236 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SQORQ9Y6N5 450 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 PTPRJQ12913 1337 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 K7ENM7 598 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 TNFRSF10AO00220 468 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SLC16A4O15374 487 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 DLGAP3O95886 979 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SERPINA6P08185 405 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 ZNF182P17025 639 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 ZNF76P36508 570 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 DNASE1L3Q13609 305 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CRY2Q49AN0 593 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 POLNQ7Z5Q5 900 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FAM71AQ8IYT1 594 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 FBXW8Q8N3Y1 598 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 NRBF2Q96F24 287 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 CITED4Q96RK1 184 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 HGH1Q9BTY7 390 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 SLC7A5P2Q9GIP4 190 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 RPAP3Q9H6T3 665 aaPredicted RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 CLK4Q9HAZ1 481 aaKnown RBP9.55□□□□□ -0.88
RPGR-202ENST00000339363 GNPTGQ9UJJ9 305 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 PRR12Q9ULL5 1215 aa9.55□□□□□ -0.88
RPGR-202ENST00000339363 E5RJQ4 531 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 NEMP1O14524 444 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 DEAF1O75398 565 aaPredicted RBP9.54□□□□□ -0.88
RPGR-202ENST00000339363 CCDC159P0C7I6 412 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 CHRNB1P11230 501 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 GRK2P25098 689 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 DSG3P32926 999 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 VAMP7P51809 220 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 PFKPQ01813 784 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 PHKG1Q16816 387 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 NANOGP8Q6NSW7 305 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 SLC39A4Q6P5W5 647 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 TMEM26Q6ZUK4 368 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 GRIN3AQ8TCU5 1115 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 DCPSQ96C86 337 aaKnown RBP9.54□□□□□ -0.88
RPGR-202ENST00000339363 APOPT1Q96IL0 206 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 MAN1C1Q9NR34 630 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 C20orf96Q9NUD7 363 aaPredicted RBP9.54□□□□□ -0.88
RPGR-202ENST00000339363 GTF3C4Q9UKN8 822 aa9.54□□□□□ -0.88
RPGR-202ENST00000339363 TBC1D30Q9Y2I9 924 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms