RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
LINC01116-202ENST00000339037 CIPCQ9C0C6 399 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 MIR1-1HGQ9H1L0 117 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 TMEM8AQ9HCN3 771 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 ITM2CQ9NQX7 267 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 ELOVL2Q9NXB9 296 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 IGSF10Q6WRI0 2623 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 APC2O95996 2303 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 KNL1Q8NG31 2342 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 GPR37O15354 613 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 RPL13P26373 211 aaKnown RBP16.37■□□□□ 0.21
LINC01116-202ENST00000339037 OXTRP30559 389 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
LINC01116-202ENST00000339037 ZNF234Q14588 700 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 ADAMTS14Q8WXS8 1223 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
LINC01116-202ENST00000339037 PIWIL1Q96J94 861 aaKnown RBP16.37■□□□□ 0.21
LINC01116-202ENST00000339037 LHX6Q9UPM6 363 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 MAPK8IP1Q9UQF2 711 aa16.37■□□□□ 0.21
LINC01116-202ENST00000339037 SLC12A8A0AV02 714 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 IGLV3-19P01714 112 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 EPHX1P07099 455 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 ACADMP11310 421 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 HOXB3P14651 431 aaPredicted RBP16.36■□□□□ 0.21
LINC01116-202ENST00000339037 PRKCHP24723 683 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 GTF2H1P32780 548 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 NDUFA8P51970 172 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 SLC8A3P57103 927 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 YWHAGP61981 247 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC01116-202ENST00000339037 ARID5AQ03989 594 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 DCAF12L1Q5VU92 463 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 KRT39Q6A163 491 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 SERPINA13PQ6UXR4 307 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 PIGZQ86VD9 579 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 PROSER1Q86XN7 944 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 CPXM2Q8N436 756 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 PNPLA1Q8N8W4 532 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 DDI1Q8WTU0 396 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 SORCS1Q8WY21 1168 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 FAXDC2Q96IV6 333 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 SLC2A11Q9BYW1 496 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 CISHQ9NSE2 258 aa16.36■□□□□ 0.21
LINC01116-202ENST00000339037 FAM237AA0A1B0GTK4 181 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
LINC01116-202ENST00000339037 CER1O95813 267 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 SYKP43405 635 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 MXI1P50539 228 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 COPAP53621 1224 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 ADAM9Q13443 819 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 COL9A2Q14055 689 aaPredicted RBP16.35■□□□□ 0.21
LINC01116-202ENST00000339037 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 IL27RAQ6UWB1 636 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
LINC01116-202ENST00000339037 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 SETD7Q8WTS6 366 aaKnown RBP16.35■□□□□ 0.21
LINC01116-202ENST00000339037 PLD4Q96BZ4 506 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 TMEM176AQ96HP8 235 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 ARID3AQ99856 593 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 UBXN6Q9BZV1 441 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 PCOLCE2Q9UKZ9 415 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 CLEC4EQ9ULY5 219 aa16.35■□□□□ 0.21
LINC01116-202ENST00000339037 APOBEC2Q9Y235 224 aaKnown RBP16.35■□□□□ 0.21
LINC01116-202ENST00000339037 METTL12A8MUP2 240 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 TAF4O00268 1085 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 TIMM44O43615 452 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 CBFA2T3O75081 653 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 ZBED1O96006 694 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 HARS2P49590 506 aaKnown RBP16.34■□□□□ 0.21
LINC01116-202ENST00000339037 TKTL1P51854 596 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 RAD23BP54727 409 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 SCAPQ12770 1279 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 ARHGAP17Q68EM7 881 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 GLRX5Q86SX6 157 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 FAM217AQ8IXS0 508 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 ANKRD52Q8NB46 1076 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
LINC01116-202ENST00000339037 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 GOLPH3LQ9H4A5 285 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 GAREM1Q9H706 876 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 IL21RQ9HBE5 538 aa16.34■□□□□ 0.21
LINC01116-202ENST00000339037 EIF2B4Q9UI10 523 aaKnown RBP16.34■□□□□ 0.21
LINC01116-202ENST00000339037 FNDC3AQ9Y2H6 1198 aaKnown RBP16.34■□□□□ 0.21
LINC01116-202ENST00000339037 CAPNS1P04632 268 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 ZNF883P0CG24 379 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 MATKP42679 507 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 DPYDQ12882 1025 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 MPPE1Q53F39 396 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 TMEM215Q68D42 235 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 FAM124AQ86V42 546 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 OR2T3Q8NH03 318 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 SNX19Q92543 992 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms