RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 GABBR2O75899 941 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 ADH1CP00326 375 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 SERPING1P05155 500 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 CISD3P0C7P0 127 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 RARGP13631 454 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 MPLP40238 635 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 EIF2DP41214 584 aaKnown RBP12.13□□□□□ -0.47
TREM2-201ENST00000338469 PRKCIP41743 596 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 GRIA2P42262 883 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 WASP42768 502 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
TREM2-201ENST00000338469 GAD2Q05329 585 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 CCDC173Q0VFZ6 552 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 ARHGAP17Q68EM7 881 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 Q6ZNB5 142 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 CCDC186Q7Z3E2 898 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 NOP9Q86U38 636 aaKnown RBP12.13□□□□□ -0.47
TREM2-201ENST00000338469 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
TREM2-201ENST00000338469 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 TBC1D14Q9P2M4 693 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 SH3BP1Q9Y3L3 701 aa12.13□□□□□ -0.47
TREM2-201ENST00000338469 BZW2Q9Y6E2 419 aaKnown RBP12.13□□□□□ -0.47
TREM2-201ENST00000338469 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
TREM2-201ENST00000338469 CHD8Q9HCK8 2581 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 A0A1W2PQF6 199 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 O00370 1275 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 APODP05090 189 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
TREM2-201ENST00000338469 SKILP12757 684 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 SDHBP21912 280 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 TNFRSF4P43489 277 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 CDR2Q01850 454 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 CREB5Q02930 508 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 CNGA2Q16280 664 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 MEA1Q16626 185 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 ANO4Q32M45 955 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 MAP7D1Q3KQU3 841 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 STPG1Q5TH74 334 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 EGFLAMQ63HQ2 1017 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 WDR59Q6PJI9 974 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 OTUB2Q96DC9 234 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 AGPAT1Q99943 283 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 CD93Q9NPY3 652 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
TREM2-201ENST00000338469 TMEM74BQ9NUR3 256 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 SEPT11Q9NVA2 429 aaKnown RBP12.12□□□□□ -0.47
TREM2-201ENST00000338469 PLK2Q9NYY3 685 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
TREM2-201ENST00000338469 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 CLEC4EQ9ULY5 219 aa12.12□□□□□ -0.47
TREM2-201ENST00000338469 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
TREM2-201ENST00000338469 TBC1D3BA6NDS4 549 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 WASH3PC4AMC7 463 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 M0QYV0 167 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 STC2O76061 302 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 MMEP08473 750 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 ADRB1P08588 477 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 TNFAIP3P21580 790 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 GBP1P32455 592 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 ATP5C1P36542 298 aaKnown RBP12.11□□□□□ -0.47
TREM2-201ENST00000338469 P2RY2P41231 377 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 LIMK1P53667 647 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 BCAT1P54687 386 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 AASDHQ4L235 1098 aaPredicted RBP12.11□□□□□ -0.47
TREM2-201ENST00000338469 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 KIAA1211LQ6NV74 962 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
TREM2-201ENST00000338469 BHMTQ93088 406 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 EXOC4Q96A65 974 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 SLC6A17Q9H1V8 727 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 MARK1Q9P0L2 795 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 PCDHGC3Q9UN70 934 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
TREM2-201ENST00000338469 TNRC6BQ9UPQ9 1833 aaKnown RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 HMBSP08397 361 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 PLEKP08567 350 aaPredicted RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 TYRP14679 529 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 CHRNB2P17787 502 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 GABRG2P18507 467 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms