RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NLRC4Q9NPP4 1024 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 NOCTQ9UK39 431 aaKnown RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 MMP17Q9ULZ9 603 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 SYCE3A1L190 88 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 TBC1D3BA6NDS4 549 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 SGK1O00141 431 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 LRP3O75074 770 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 LATS1O95835 1130 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 TIE1P35590 1138 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 ZNF165P49910 485 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 TBX4P57082 545 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 YWHAZP63104 245 aaKnown RBP15.89■□□□□ 0.13
PRKN-201ENST00000338468 UBXN1Q04323 297 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 EIF4EBP2Q13542 120 aaPredicted RBP15.89■□□□□ 0.13
PRKN-201ENST00000338468 LPAL2Q16609 132 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 FAM133BQ5BKY9 247 aaKnown RBP15.89■□□□□ 0.13
PRKN-201ENST00000338468 PPM1JQ5JR12 505 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 C10orf76Q5T2E6 689 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 TAF3Q5VWG9 929 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 NADSYN1Q6IA69 706 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 OLFML1Q6UWY5 402 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 TMEM92Q6UXU6 159 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 PRR23BQ6ZRT6 265 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 CAMKK1Q8N5S9 505 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 ANKRD20A12PQ8NF67 263 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 CCDC26Q8TAB7 109 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 SLC20A1Q8WUM9 679 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 SLC2A13Q96QE2 648 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 POPDC2Q9HBU9 364 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
PRKN-201ENST00000338468 USP24Q9UPU5 2620 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 EML5Q05BV3 1969 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 CCDC163A0A0D9SF12 145 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 SLC30A4O14863 429 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 TEX33O43247 280 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 TSPAN3O60637 253 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 GFPT2O94808 682 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 KLF8O95600 359 aaPredicted RBP15.88■□□□□ 0.13
PRKN-201ENST00000338468 RETP07949 1114 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 MMEP08473 750 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 CHRNB2P17787 502 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 HOXD9P28356 352 aaPredicted RBP15.88■□□□□ 0.13
PRKN-201ENST00000338468 SLC6A4P31645 630 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 SOX5P35711 763 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 DGKGP49619 791 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 SGSHP51688 502 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 NNTQ13423 1086 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 DEFB106AQ8N104 65 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 TXNDC5Q8NBS9 432 aaKnown RBP15.88■□□□□ 0.13
PRKN-201ENST00000338468 TMEM35BQ8NCS4 154 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 AZIN2Q96A70 460 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 MYEOVQ96EZ4 313 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 SERPINB11Q96P15 392 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 ASNSD1Q9NWL6 643 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 TLR6Q9Y2C9 796 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 SLC27A6Q9Y2P4 619 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 DAAM1Q9Y4D1 1078 aa15.88■□□□□ 0.13
PRKN-201ENST00000338468 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.88■□□□□ 0.13
PRKN-201ENST00000338468 MYO18AQ92614 2054 aaKnown RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 CFAP47Q6ZTR5 3102 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 FAM170AA1A519 330 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 SMTNL1A8MU46 457 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 IRAK2O43187 625 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 ACSL4O60488 711 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 GRAP2O75791 330 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 GLI1P08151 1106 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 GABRB2P47870 512 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 NOMO3P69849 1222 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 SLC6A3Q01959 620 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 CRY1Q16526 586 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 GEN1Q17RS7 908 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 HSF5Q4G112 596 aaPredicted RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 PREPLQ4J6C6 727 aaPredicted RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 EGFLAMQ63HQ2 1017 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 NUGGCQ68CJ6 796 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 RNF43Q68DV7 783 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 OR6B2Q6IFH4 312 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 RFWD3Q6PCD5 774 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 KCNV2Q8TDN2 545 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 NOX5Q96PH1 765 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 ACOX2Q99424 681 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 TRIM62Q9BVG3 475 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 EBF1Q9UH73 591 aa15.87■□□□□ 0.13
PRKN-201ENST00000338468 XPO7Q9UIA9 1087 aaKnown RBP15.87■□□□□ 0.13
PRKN-201ENST00000338468 CAPN9O14815 690 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 HSF2BPO75031 334 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 APBB3O95704 486 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 LSM8O95777 96 aaKnown RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 CYBBP04839 570 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CNR2P34972 360 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 FMO1Q01740 532 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 MPPE1Q53F39 396 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 C2CD6Q53TS8 623 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 DCAF6Q58WW2 860 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms