RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 ZNF689Q96CS4 500 aaPredicted RBP11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 WDR6Q9NNW5 1121 aaKnown RBP11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 ARHGEF4Q9NR80 690 aa11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 GMIPQ9P107 970 aa11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 SLC12A6Q9UHW9 1150 aa11.26□□□□□ -0.61
MS4A4A-201ENST00000337908 H3BQF6 201 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 RNF40O75150 1001 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 APOEP02649 317 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 FGBP02675 491 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 IVDP26440 423 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 ELF1P32519 619 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 HTR7P34969 479 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 OR1D2P34982 312 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 RPL22P35268 128 aaKnown RBP11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 ARL4CP56559 192 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 DUSP4Q13115 394 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 VEPH1Q14D04 833 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 TPGS2Q68CL5 300 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 NCBP2-AS2Q69YL0 99 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 SLC8B1Q6J4K2 584 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 MSANTD2Q6P1R3 559 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 RHBDF2Q6PJF5 856 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 CENPUQ71F23 418 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 PRUNE1Q86TP1 453 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 IQCKQ8N0W5 287 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 PDZD8Q8NEN9 1154 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 ZBTB9Q96C00 473 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 QKIQ96PU8 341 aaKnown RBP eCLIP11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 CDK5RAP1Q96SZ6 601 aaKnown RBP11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 KLC2Q9H0B6 622 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 VPS18Q9P253 973 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 MRPL42Q9Y6G3 142 aaKnown RBP11.25□□□□□ -0.61
MS4A4A-201ENST00000337908 GOLGA6CA6NDK9 693 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 NCAM2O15394 837 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GOLGA6DP0CG33 693 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 MX2P20592 715 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 RBL1P28749 1068 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 CA8P35219 290 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 ALDH1A3P47895 512 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GDF10P55107 478 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 COG7P83436 770 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 DSG1Q02413 1049 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GBE1Q04446 702 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 FPGSQ05932 587 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TAF10Q12962 218 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 PAFAH1B3Q15102 231 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 ARHGEF18Q6ZSZ5 1173 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 SCD5Q86SK9 330 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 DDX53Q86TM3 631 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 FIBCD1Q8N539 461 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TTC9BQ8N6N2 239 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GLIS1Q8NBF1 620 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TTC25Q96NG3 672 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 HAPLN3Q96S86 360 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 CCDC77Q9BR77 488 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TXLNGYQ9BZA5 131 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 CATSPERBQ9H7T0 1116 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 C10orf88Q9H8K7 445 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TMPRSS4Q9NRS4 437 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 ARHGEF38Q9NXL2 777 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 GOLGA6AQ9NYA3 693 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 CLIC5Q9NZA1 410 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 HSFX1Q9UBD0 423 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 SFMBT1Q9UHJ3 866 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 MAGED2Q9UNF1 606 aaPredicted RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TLR6Q9Y2C9 796 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 E7EVH7 732 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 AGPSO00116 658 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 PRRG1O14668 218 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 MFSD11O43934 449 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 SOAT2O75908 522 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 SYF2O95926 243 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 IGLV3-25P01717 112 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 RPL17P18621 184 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 ITGB8P26012 769 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 EPHB2P29323 1055 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 TBX4P57082 545 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 AP1B1Q10567 949 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 EFEMP1Q12805 493 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 MTA1Q13330 715 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 DPYSQ14117 519 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 KRT71Q3SY84 523 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 C10orf120Q5SQS8 335 aa11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 RNASEH2BQ5TBB1 312 aaKnown RBP11.24□□□□□ -0.61
MS4A4A-201ENST00000337908 RWDD4Q6NW29 188 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms