RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 KCNJ11Q14654 390 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ACAP1Q15027 740 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SPDYCQ5MJ68 293 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SLC9A4Q6AI14 798 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 MFSD5Q6N075 450 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CAND1Q86VP6 1230 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 CCHCR1Q8TD31 782 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 LINC01599Q8WXQ3 324 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CCDC97Q96F63 343 aaPredicted RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 SCLYQ96I15 445 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 HSFY1Q96LI6 401 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 GLT1D1Q96MS3 346 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 TKTL2Q9H0I9 626 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CNOT10Q9H9A5 744 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 POPDC2Q9HBU9 364 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SMYD2Q9NRG4 433 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CREBZFQ9NS37 354 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 NKIRAS1Q9NYS0 192 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CAPN7Q9Y6W3 813 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 RANBP2P49792 3224 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 GOLGA8TH3BQL2 631 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 PTPN9P43378 593 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 OVGP1Q12889 678 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 DPYSL2Q16555 572 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 TRABD2AQ86V40 505 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ATAD1Q8NBU5 361 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ABCF3Q9NUQ8 709 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ZC3H7BQ9UGR2 993 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 A0A0U1RQF3 1178 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 RNF103O00237 685 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 LTFP02788 710 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 INHAP05111 366 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 TPH1P17752 444 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ERCC2P18074 760 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ADRA1DP25100 572 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 MAP2K2P36507 400 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 MSH2P43246 934 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ACADSBP45954 432 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 TNFAIP8L3Q5GJ75 292 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 CLLU1OSQ5K130 101 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 GKAP1Q5VSY0 366 aaPredicted RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 CCSAPQ6IQ19 270 aaPredicted RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 FAM117BQ6P1L5 589 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 TAC4Q86UU9 113 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 PNPLA1Q8N8W4 532 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 STK32AQ8WU08 396 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 P2RY11Q96G91 374 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 FAXDC2Q96IV6 333 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SLC13A1Q9BZW2 595 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 C5orf42Q9H799 3197 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 SCN10AQ9Y5Y9 1956 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 WDR27A2RRH5 827 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 TBX18O95935 607 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 EPHB2P29323 1055 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 NOS2P35228 1153 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 CCL23P55773 120 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 EMC10Q5UCC4 262 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 NPY6RQ99463 290 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 TMEM109Q9BVC6 243 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 C9IYK1 514 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 RDXP35241 583 aaKnown RBP12.99□□□□□ -0.33
LIMK1-201ENST00000336180 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 RNF180Q86T96 592 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-201ENST00000336180 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 STMN4Q9H169 189 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-201ENST00000336180 STARD7Q9NQZ5 370 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 EFR3BQ9Y2G0 817 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
LIMK1-201ENST00000336180 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 ODC1P11926 461 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 PAX7P23759 505 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
LIMK1-201ENST00000336180 ADRA1BP35368 520 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 GEMIN4P57678 1058 aaKnown RBP12.98□□□□□ -0.33
LIMK1-201ENST00000336180 TPI1P60174 286 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 PTK7Q13308 1070 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 LVRNQ6Q4G3 990 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
LIMK1-201ENST00000336180 HTR3CQ8WXA8 447 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 KLC2Q9H0B6 622 aa12.98□□□□□ -0.33
LIMK1-201ENST00000336180 PLAC1Q9HBJ0 212 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms