RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 LGALS13Q9UHV8 139 aa13.96□□□□□ -0.17
LMO1-201ENST00000335790 SLC12A6Q9UHW9 1150 aa13.96□□□□□ -0.17
LMO1-201ENST00000335790 HEY1Q9Y5J3 304 aa13.96□□□□□ -0.17
LMO1-201ENST00000335790 SZT2Q5T011 3432 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 H7C4K7 107 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 KCNN4O15554 427 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 IRAK2O43187 625 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 TMEM63AO94886 807 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 OR4Q2P0C623 313 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 CAPN2P17655 700 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 GRIK1P39086 918 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 GLUD2P49448 558 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 ARL4CP56559 192 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 YWHAGP61981 247 aaKnown RBP eCLIP13.95□□□□□ -0.18
LMO1-201ENST00000335790 NRG1Q02297 640 aaPredicted RBP13.95□□□□□ -0.18
LMO1-201ENST00000335790 DMTNQ08495 405 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 NME3Q13232 169 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 GPR17Q13304 367 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 PRKD1Q15139 912 aaPredicted RBP13.95□□□□□ -0.18
LMO1-201ENST00000335790 HIF1AQ16665 826 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 CTXN3Q4LDR2 81 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 FAM171A1Q5VUB5 890 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 CNKSR3Q6P9H4 555 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 SCD5Q86SK9 330 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 MON1AQ86VX9 555 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 TDRPQ86YL5 185 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 RNF168Q8IYW5 571 aaPredicted RBP13.95□□□□□ -0.18
LMO1-201ENST00000335790 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 ARHGAP18Q8N392 663 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 RIBC1Q8N443 379 aaPredicted RBP13.95□□□□□ -0.18
LMO1-201ENST00000335790 MCUQ8NE86 351 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 SCAMP5Q8TAC9 235 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 SPPL2BQ8TCT7 592 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 SCLYQ96I15 445 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 BRD8Q9H0E9 1235 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 SAYSD1Q9NPB0 183 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
LMO1-201ENST00000335790 NOVA2Q9UNW9 492 aaKnown RBP13.95□□□□□ -0.18
LMO1-201ENST00000335790 BRCA2P51587 3418 aa13.95□□□□□ -0.18
LMO1-201ENST00000335790 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
LMO1-201ENST00000335790 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
LMO1-201ENST00000335790 E7EVH7 732 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 EEF2KO00418 725 aaKnown RBP13.94□□□□□ -0.18
LMO1-201ENST00000335790 NCAM2O15394 837 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 ACSL3O95573 720 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 IVLP07476 585 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 TPSB2P20231 275 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 HOXC13P31276 330 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 ACTN2P35609 894 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 PPP2R2AP63151 447 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 PPP2R5DQ14738 602 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 PDK1Q15118 436 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 TPSAB1Q15661 275 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 ANKS3Q6ZW76 656 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
LMO1-201ENST00000335790 TFB1MQ8WVM0 346 aaKnown RBP13.94□□□□□ -0.18
LMO1-201ENST00000335790 EDEM1Q92611 657 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 TMPRSS4Q9NRS4 437 aa13.94□□□□□ -0.18
LMO1-201ENST00000335790 TCRBV7S3A2A0A539 114 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 FAM72CH0Y354 149 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
LMO1-201ENST00000335790 MFSD11O43934 449 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 AMHP03971 560 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 ERCC2P18074 760 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
LMO1-201ENST00000335790 MMP13P45452 471 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 LMAN1P49257 510 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 IRAK1P51617 712 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 CCL23P55773 120 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 MAGOHP61326 146 aaKnown RBP13.93□□□□□ -0.18
LMO1-201ENST00000335790 ZNF33AQ06730 810 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 PDIA2Q13087 525 aaKnown RBP13.93□□□□□ -0.18
LMO1-201ENST00000335790 SEMA5AQ13591 1074 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 FNBP1LQ5T0N5 605 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 ARTNQ5T4W7 220 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 FAM72AQ5TYM5 149 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 MANEALQ5VSG8 457 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 FAM72DQ6L9T8 149 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 FAM72BQ86X60 149 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 ADAM32Q8TC27 787 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 EPS8L3Q8TE67 593 aaKnown RBP13.93□□□□□ -0.18
LMO1-201ENST00000335790 HTR3CQ8WXA8 447 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 C9orf72Q96LT7 481 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 EPAS1Q99814 870 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
LMO1-201ENST00000335790 CWH43Q9H720 699 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms