RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TOMM70O94826 608 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 LUC7L3O95232 432 aaKnown RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 APOA4P06727 396 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PSEN1P49768 467 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 TEDDM1Q5T9Z0 273 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PHACTR4Q8IZ21 702 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 GANQ9H2C0 597 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PIH1D1Q9NWS0 290 aaKnown RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 NCF1BA6NI72 391 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 NCF1CA8MVU1 366 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 NCF1P14598 390 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PREPLQ4J6C6 727 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 LLGL2Q6P1M3 1020 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 RBM23Q86U06 439 aaKnown RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 C12orf56Q8IXR9 622 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 EPS8L3Q8TE67 593 aaKnown RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 MANSC1Q9H8J5 431 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PSD3Q9NYI0 1048 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 FRMD3A2A2Y4 597 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 GLRA3O75311 464 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 POLR2EP19388 210 aaKnown RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 PLA2G4AP47712 749 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SGCGQ13326 291 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 DSG4Q86SJ6 1040 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 TOP6BLQ8N6T0 577 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SPG21Q9NZD8 308 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 DNPEPQ9ULA0 475 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 RUVBL2Q9Y230 463 aaKnown RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SERPINB8P50452 374 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ZNF143P52747 638 aaPredicted RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ESRRGP62508 458 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 BCL2L1Q07817 233 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 TAF11Q15544 211 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 CCL14Q16627 93 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 FNDC3BQ53EP0 1204 aaKnown RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SUSD6Q92537 303 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 C2orf49Q9BVC5 232 aaPredicted RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ECT2Q9H8V3 914 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 MORC2Q9Y6X9 1032 aaPredicted RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 OR6C75A6NL08 312 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 APOC4-APOC2K7ER74 178 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 PJA2O43164 708 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 B4GALT4O60513 344 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 APOC2P02655 101 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 KDELR1P24390 212 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 HNRNPH2P55795 449 aaKnown RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 MGAT5Q09328 741 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 TMEM259Q4ZIN3 620 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 RGS9BPQ6ZS82 235 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 EFL1Q7Z2Z2 1120 aaKnown RBP15.41■□□□□ 0.06
C9orf47-201ENST00000334490 PRUNE1Q86TP1 453 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SLC26A11Q86WA9 606 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 IFNEQ86WN2 208 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 FGFBP2Q9BYJ0 223 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SHCBP1LQ9BZQ2 653 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 GPAMQ9HCL2 828 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ARHGAP28Q9P2N2 729 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SHOC2Q9UQ13 582 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 CDYLQ9Y232 598 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ALDH1A2O94788 518 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 CYP2C18P33260 490 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 FAM35AQ86V20 835 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ZSWIM2Q8NEG5 633 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 CCT8L2Q96SF2 557 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SYTL2Q9HCH5 934 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 SPASTQ9UBP0 616 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 CNTNAP1P78357 1384 aa15.41■□□□□ 0.06
C9orf47-201ENST00000334490 ENO3P13929 434 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 CHKAP35790 457 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 ARL2P36404 184 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 FMO1Q01740 532 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 RFX8Q6ZV50 586 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 ARID3BQ8IVW6 561 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 ZNF557Q8N988 423 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 TSPAN18Q96SJ8 248 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 DERAQ9Y315 318 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 USP15Q9Y4E8 981 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 KCPQ6ZWJ8 1503 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MAGEB16A2A368 324 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 FGBP02675 491 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 RBL1P28749 1068 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 CLK2P49760 499 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 SH3D19Q5HYK7 790 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 PPP1R26Q5T8A7 1209 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 GPR152Q8TDT2 470 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 ERLEC1Q96DZ1 483 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MRPL45Q9BRJ2 306 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MRPL46Q9H2W6 279 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 FAM153AQ9UHL3 310 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MOXD2PA6NHM9 499 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 C5orf58C9J3I9 102 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms