RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 NOMO3P69849 1222 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 WASHC5Q12768 1159 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 BMPR2Q13873 1038 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 VASH1Q7L8A9 365 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 POLNQ7Z5Q5 900 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 SYTL5Q8TDW5 730 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 STARD8Q92502 1023 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 KCNN1Q92952 543 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PLEKHA8Q96JA3 519 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PARVBQ9HBI1 364 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 APOBEC3GQ9HC16 384 aaKnown RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 DDX28Q9NUL7 540 aaKnown RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 DDX43Q9NXZ2 648 aaKnown RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 IP6K2Q9UHH9 426 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 ITGB1BP2Q9UKP3 347 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 SSX2IPQ9Y2D8 614 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 TRAFD1O14545 582 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 STAM2O75886 525 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 THRAP10827 490 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 KLRC2P26717 231 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PTK7Q13308 1070 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 KLF1Q13351 362 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 BSPRYQ5W0U4 402 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 UGT2A3Q6UWM9 527 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 MON1BQ7L1V2 547 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 ZNF410Q86VK4 478 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 ABRAQ8N0Z2 381 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 TJP2Q9UDY2 1190 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 GIT1Q9Y2X7 761 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 ST14Q9Y5Y6 855 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 ARHGEF37A1IGU5 675 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 H7C0C1 242 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 K7ERI5 159 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 SMIM18P0DKX4 95 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 ATP5OP48047 213 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
LIMK2-202ENST00000333611 ARPP19P56211 112 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 SCYL2Q6P3W7 929 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 KATNAL2Q8IYT4 538 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 RCOR2Q8IZ40 523 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 DDI1Q8WTU0 396 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 PDCD6IPQ8WUM4 868 aaKnown RBP12.21□□□□□ -0.45
LIMK2-202ENST00000333611 ZNF606Q8WXB4 792 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 SLCO2A1Q92959 643 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 EBF4Q9BQW3 602 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 TMEM79Q9BSE2 394 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 WWP1Q9H0M0 922 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 TRIM39Q9HCM9 518 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 PCNTO95613 3336 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 CFAP99D6REC4 459 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 ITM2AO43736 263 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 CD48P09326 243 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 ENO3P13929 434 aaPredicted RBP12.21□□□□□ -0.45
LIMK2-202ENST00000333611 GCNT1Q02742 428 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 Q6ZNX1 250 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 CLIP4Q8N3C7 705 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 KCTD6Q8NC69 237 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.45
LIMK2-202ENST00000333611 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 WARS2Q9UGM6 360 aaKnown RBP12.21□□□□□ -0.45
LIMK2-202ENST00000333611 FBXO40Q9UH90 709 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 CDC14AQ9UNH5 594 aa12.21□□□□□ -0.45
LIMK2-202ENST00000333611 GRAP2O75791 330 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 KCNA2P16389 499 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ENDOUP21128 410 aaKnown RBP12.21□□□□□ -0.46
LIMK2-202ENST00000333611 COPAP53621 1224 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 GPX6P59796 221 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 FAAP100Q0VG06 881 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 TRPC3Q13507 836 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF423Q2M1K9 1284 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF280DQ6N043 979 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 DARS2Q6PI48 645 aaKnown RBP12.21□□□□□ -0.46
LIMK2-202ENST00000333611 MYO1HQ8N1T3 1032 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ALLCQ8N6M5 410 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 CALML6Q8TD86 181 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ANKRD36BP1Q96IX9 119 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 ZFYVE28Q9HCC9 887 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.46
LIMK2-202ENST00000333611 E5RJQ4 531 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 CYB561D2O14569 222 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 GABBR2O75899 941 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 CAP2P40123 477 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 OGDHQ02218 1023 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 GPR162Q16538 588 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 ZNF568Q3ZCX4 644 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 FAM160B2Q86V87 743 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 TTC30AQ86WT1 665 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
LIMK2-202ENST00000333611 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.2□□□□□ -0.46
LIMK2-202ENST00000333611 CCDC138Q96M89 665 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms