RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CD320Q9NPF0 282 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 ANKMY1Q9P2S6 941 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CDY2AQ9Y6F7 541 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 CDY1Q9Y6F8 540 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 PSME4Q14997 1843 aa8.63□□□□□ -1.03
SKA2-201ENST00000330137 KRBA1A5PL33 1030 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 ZNF195O14628 629 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 GIPC1O14908 333 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 GNPATO15228 680 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 KMOO15229 486 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 XPOTO43592 962 aaKnown RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 GLRA3O75311 464 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 H2AFYO75367 372 aaKnown RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 MYF6P23409 242 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PRDX5P30044 214 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 YWHAGP61981 247 aaKnown RBP eCLIP8.62□□□□□ -1.03
SKA2-201ENST00000330137 ZNF846Q147U1 533 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 CYTH1Q15438 398 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TAZQ16635 292 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 ANKRD26P1Q6NSI1 321 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 MAMDC4Q6UXC1 1216 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 C4orf22Q6V702 233 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PODNQ7Z5L7 613 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 THNSL1Q8IYQ7 743 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 LILRA2Q8N149 483 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 GSDMBQ8TAX9 411 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 TAMM41Q96BW9 452 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PHF12Q96QT6 1004 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 CSRNP1Q96S65 589 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PKP2Q99959 881 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 EFHD1Q9BUP0 239 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TUT1Q9H6E5 874 aaKnown RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 COPS7BQ9H9Q2 264 aaPredicted RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 CXorf21Q9HAI6 301 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 XPO7Q9UIA9 1087 aaKnown RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 DNAJC16Q9Y2G8 782 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 MEIS1O00470 390 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 STK25O00506 426 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 IDH3BO43837 385 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 CDKN2BP42772 138 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 GCLMP48507 274 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 GK3PQ14409 553 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 PIGHQ14442 188 aaPredicted RBP8.62□□□□□ -1.03
SKA2-201ENST00000330137 KCNJ8Q15842 424 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 ODR4Q5SWX8 454 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 SMIM5Q71RC9 77 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 SIX6OS1Q8N1H7 587 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TTC39CQ8N584 583 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 ANKFN1Q8N957 763 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 FBXL13Q8NEE6 735 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 S100ZQ8WXG8 99 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 USP6NLQ92738 828 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 ATP2A3Q93084 1043 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 YME1L1Q96TA2 773 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 TMEM79Q9BSE2 394 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 RMND5AQ9H871 391 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 CAAP1Q9H8G2 361 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 DCDC2Q9UHG0 476 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 NOX1Q9Y5S8 564 aa8.62□□□□□ -1.03
SKA2-201ENST00000330137 M0QX08 132 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 EIF3FO00303 357 aaPredicted RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 ACOT8O14734 319 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 KRT1P04264 644 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 LDHBP07195 334 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 KITP10721 976 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 P4HA1P13674 534 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 JUNBP17275 347 aaPredicted RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 CD58P19256 250 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 ELK3P41970 407 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 MAGEA6P43360 314 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 KRT6CP48668 564 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 NAB1Q13506 487 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ITPK1Q13572 414 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CES4AQ5XG92 561 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 EPGNQ6UW88 154 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 MFSD7Q6UXD7 560 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 BBS12Q6ZW61 710 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CHAC2Q8WUX2 184 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 RSAD2Q8WXG1 361 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 TFAP2CQ92754 450 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 AKT1S1Q96B36 256 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ASB9Q96DX5 294 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 OSBPL10Q9BXB5 764 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 NPLQ9BXD5 320 aaPredicted RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 NDEL1Q9GZM8 345 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 C20orf27Q9GZN8 174 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 LIN28AQ9H9Z2 209 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 CYP4F11Q9HBI6 524 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 SPO11Q9Y5K1 396 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms