RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 C12orf29Q8N999 325 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 PPFIBP2Q8ND30 876 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 WDR60Q8WVS4 1066 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 PPARGC1AQ9UBK2 798 aaKnown RBP20.52■□□□□ 0.87
SOX2-201ENST00000325404 A6NJR5 290 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 PIK3R2O00459 728 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 TBX10O75333 385 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 TM7SF2O76062 418 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 GRIK3Q13003 919 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 CES4AQ5XG92 561 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 TREML1Q86YW5 311 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 CPB2Q96IY4 423 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 MAML3Q96JK9 1138 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 KATNBL1Q9H079 304 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 EIF2B3Q9NR50 452 aaKnown RBP20.51■□□□□ 0.87
SOX2-201ENST00000325404 ARMCX1Q9P291 453 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 RCOR3Q9P2K3 495 aaPredicted RBP20.51■□□□□ 0.87
SOX2-201ENST00000325404 MAD1L1Q9Y6D9 718 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 C2orf71A6NGG8 1288 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 UGT1A9O60656 530 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 NPTXRO95502 500 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 SNAI1O95863 264 aaPredicted RBP20.51■□□□□ 0.87
SOX2-201ENST00000325404 AQP5P55064 265 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 BMPR2Q13873 1038 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 NBPF20Q3BBV1 942 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 TRMT10BQ6PF06 316 aaKnown RBP20.51■□□□□ 0.87
SOX2-201ENST00000325404 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 DEPDC1BQ8WUY9 529 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 NRG4Q8WWG1 115 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 FAM96AQ9H5X1 160 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 UGT1A7Q9HAW7 530 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 UGT1A10Q9HAW8 530 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 UGT1A8Q9HAW9 530 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 PCMTD2Q9NV79 361 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 ANGPTL2Q9UKU9 493 aa20.51■□□□□ 0.87
SOX2-201ENST00000325404 LGALS2P05162 132 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 CDC25CP30307 473 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 ADCYAP1R1P41586 468 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 C6orf163Q5TEZ5 329 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 ADGRF2Q8IZF7 708 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 SCG3Q8WXD2 468 aaKnown RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 EMID1Q96A84 441 aaPredicted RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 ZBTB10Q96DT7 871 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 NAT9Q9BTE0 207 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 TSPAN1O60635 241 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 LINGO3P0C6S8 592 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 AOC1P19801 751 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 GBE1Q04446 702 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 SLC10A2Q12908 348 aaPredicted RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 PPP6R3Q5H9R7 873 aaPredicted RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 KCNT2Q6UVM3 1135 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 PSTKQ8IV42 348 aaKnown RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 SCUBE1Q8IWY4 988 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 SCUBE3Q8IX30 993 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 LRRC52Q8N7C0 313 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 RBM15BQ8NDT2 890 aaKnown RBP20.5■□□□□ 0.87
SOX2-201ENST00000325404 GPAMQ9HCL2 828 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 MTMR10Q9NXD2 777 aa20.5■□□□□ 0.87
SOX2-201ENST00000325404 SDR42E2A6NKP2 422 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 CIB2O75838 187 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 GABBR2O75899 941 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 DGKIO75912 1065 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 INSCQ1MX18 579 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 DCAF4L1Q3SXM0 396 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 MROH9Q5TGP6 573 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 HEATR6Q6AI08 1181 aaKnown RBP20.49■□□□□ 0.87
SOX2-201ENST00000325404 OLFM3Q96PB7 478 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 AKT3Q9Y243 479 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 CYB561D2O14569 222 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 GLRA3O75311 464 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 ZNF189O75820 626 aaPredicted RBP20.49■□□□□ 0.87
SOX2-201ENST00000325404 ZNF157P51786 506 aaPredicted RBP20.49■□□□□ 0.87
SOX2-201ENST00000325404 NIPAL4Q0D2K0 466 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 THOC5Q13769 683 aaKnown RBP20.49■□□□□ 0.87
SOX2-201ENST00000325404 LRRC8BQ6P9F7 803 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 CDKL2Q92772 493 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 CSPG4P5Q96PW8 444 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
SOX2-201ENST00000325404 TINF2Q9BSI4 451 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 VCXQ9H320 206 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 DCDC2Q9UHG0 476 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 AP4E1Q9UPM8 1137 aa20.49■□□□□ 0.87
SOX2-201ENST00000325404 EVPLQ92817 2033 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 A0A0A0MRY4 1105 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 H3BRJ5 948 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 GSRP00390 522 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 ENO1P06733 434 aaKnown RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 ACTR3P61158 418 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 IRX1P78414 480 aaPredicted RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 STRADAQ7RTN6 431 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 ACOT1Q86TX2 421 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 RASAL3Q86YV0 1011 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 WDR75Q8IWA0 830 aaKnown RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 MPP5Q8N3R9 675 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 SPATA13Q96N96 652 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 ABHD16BQ9H3Z7 469 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 CPA4Q9UI42 421 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 PPP1R12AO14974 1030 aaPredicted RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 MAP3K7O43318 606 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms