RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ZIM2Q9NZV7 527 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 HPSEQ9Y251 543 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 INSL5Q9Y5Q6 135 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 PRSS47A8MTI9 375 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 PODXLO00592 558 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 PRPF3O43395 683 aaKnown RBP3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 PAPSS2O95340 614 aaPredicted RBP3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 ACAA1P09110 424 aaPredicted RBP3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 NDUFS1P28331 727 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 HOXD12P35452 270 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 MLH1P40692 756 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 ENTPD1P49961 510 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 CACNB3P54284 484 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 RRP1P56182 461 aaKnown RBP3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 ANAPC15P60006 121 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 ACOX1Q15067 660 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 DLGAP5Q15398 846 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 GJA10Q969M2 543 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 APIPQ96GX9 242 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 MSLNLQ96KJ4 702 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 FAM227BQ96M60 508 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 SENP7Q9BQF6 1050 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 RNF26Q9BY78 433 aaPredicted RBP3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 AAMDCQ9H7C9 122 aa3.57□□□□□ -1.84
CBX3P1-201ENST00000325243 hCG_2014768A0A024R1R8 64 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 GRID2O43424 1007 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 MYF5P13349 255 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 PBX1P40424 430 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 ZNF84P51523 738 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 EGR4Q05215 589 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 POLD3Q15054 466 aaPredicted RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 SLC4A8Q2Y0W8 1093 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 MINDY4Q4G0A6 757 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 INO80DQ53TQ3 878 aaPredicted RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 C6orf10Q5SRN2 563 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 NADSYN1Q6IA69 706 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 UNC13DQ70J99 1090 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 SESTD1Q86VW0 696 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 MBD3L2Q8NHZ7 208 aaPredicted RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 LMO3Q8TAP4 145 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 SUN3Q8TAQ9 357 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 ELP5Q8TE02 316 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 IPCEF1Q8WWN9 437 aaPredicted RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 LPAR1Q92633 364 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 AKAP1Q92667 903 aaKnown RBP eCLIP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 INPP5DQ92835 1189 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 SF3B5Q9BWJ5 86 aaKnown RBP3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 FAM204AQ9H8W3 233 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 ITGB1BP2Q9UKP3 347 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 UTS2RQ9UKP6 389 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 OGDHLQ9ULD0 1010 aa3.56□□□□□ -1.84
CBX3P1-201ENST00000325243 ZNF335Q9H4Z2 1342 aaPredicted RBP3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 A6NNZ2 444 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 PLGP00747 810 aaPredicted RBP3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 HRGP04196 525 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 WNT1P04628 370 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 DUSP1P28562 367 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 CARSP49589 748 aaKnown RBP3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 GAS1P54826 345 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 DSCR9P59020 149 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 KCNJ12Q14500 433 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 FAM102BQ5T8I3 360 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 ATG9BQ674R7 924 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 SLC39A5Q6ZMH5 540 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 SKAP1Q86WV1 359 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 SDR16C5Q8N3Y7 309 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 TMEM174Q8WUU8 243 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 LRTOMTQ8WZ04 291 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 WDR83Q9BRX9 315 aaKnown RBP3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 ZNF287Q9HBT7 754 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 PLSCR4Q9NRQ2 329 aa3.55□□□□□ -1.84
CBX3P1-201ENST00000325243 RPS10-NUDT3A0A1W2PQS6 291 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 ANKRD62A6NC57 917 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 CBFA2T3O75081 653 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 RFX2P48378 723 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 DGKQP52824 942 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 RNF220Q5VTB9 566 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 NXNQ6DKJ4 435 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 KYAT3Q6YP21 454 aaKnown RBP3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 RTL10Q7L3V2 364 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 RHPN2Q8IUC4 686 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 KAT2BQ92831 832 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 NCKIPSDQ9NZQ3 722 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 WNT16Q9UBV4 365 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 ERRFI1Q9UJM3 462 aaPredicted RBP3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 MYO6Q9UM54 1294 aa3.54□□□□□ -1.84
CBX3P1-201ENST00000325243 SPATA31A5Q5VU36 1347 aa3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 SPATA31A7Q8IWB4 1347 aa3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 TTC34A8MYJ7 566 aa3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 GOLIM4O00461 696 aa3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 NTN3O00634 580 aaPredicted RBP3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 ZNF432O94892 652 aa3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 MAP4K4O95819 1239 aaPredicted RBP3.53□□□□□ -1.84
CBX3P1-201ENST00000325243 MT-ND5P03915 603 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms