RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MEIS3P2A8K0S8 358 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 M0QZ92 97 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 C2CD2LO14523 706 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 TROVE2P10155 538 aaKnown RBP eCLIP22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MLNP12872 115 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 AKR1A1P14550 325 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 TKTL1P51854 596 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 SWT1Q5T5J6 900 aaKnown RBP22.1■■□□□ 1.13
LIMS2-201ENST00000324938 TMEM86AQ8N2M4 240 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 CD248Q9HCU0 757 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 EIF2B3Q9NR50 452 aaKnown RBP22.1■■□□□ 1.13
LIMS2-201ENST00000324938 TMPRSS4Q9NRS4 437 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 FAM105AQ9NUU6 356 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MKS1Q9NXB0 559 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 COPEO14579 308 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 ATP5HO75947 161 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 FBXO21O94952 628 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 CSH1P0DML2 217 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 CSH2P0DML3 217 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 RARBP10826 455 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MLH1P40692 756 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 GRIA1P42261 906 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 GLUD2P49448 558 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MAP3K7CLP57077 242 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 DEUP1Q05D60 604 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 SPDYAQ5MJ70 313 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 SYPL2Q5VXT5 272 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MTBPQ96DY7 904 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 SRPK1Q96SB4 655 aaKnown RBP22.1■■□□□ 1.13
LIMS2-201ENST00000324938 NPHS2Q9NP85 383 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 NR2E3Q9Y5X4 410 aa22.1■■□□□ 1.13
LIMS2-201ENST00000324938 MYADML2A6NDP7 307 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 OPHN1O60890 802 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 KRT38O76015 456 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 STK10O94804 968 aaKnown RBP22.09■■□□□ 1.13
LIMS2-201ENST00000324938 DPYSQ14117 519 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 PAFAH1B3Q15102 231 aaKnown RBP22.09■■□□□ 1.13
LIMS2-201ENST00000324938 NBPF20Q3BBV1 942 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 STEAP4Q687X5 459 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 TRMT10BQ6PF06 316 aaKnown RBP22.09■■□□□ 1.13
LIMS2-201ENST00000324938 HFE2Q6ZVN8 426 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 SLC9A7Q96T83 725 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 SYT15Q9BQS2 421 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 PIGVQ9NUD9 493 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 CACNG4Q9UBN1 327 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 ST3GAL5Q9UNP4 418 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 SYNJ2BP-COX16A0A087WUM0 186 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 RNF103O00237 685 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 UGT1A9O60656 530 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 KPNA6O60684 536 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 LHX1P48742 406 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 AIF1P55008 147 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 PDK1Q15118 436 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 CYS1Q717R9 158 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 FAM35AQ86V20 835 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 KIF2BQ8N4N8 673 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 COLGALT1Q8NBJ5 622 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 P2RY11Q96G91 374 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 FERMT1Q9BQL6 677 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 TRIM56Q9BRZ2 755 aaKnown RBP22.09■■□□□ 1.13
LIMS2-201ENST00000324938 TSSK1BQ9BXA7 367 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 ULBP1Q9BZM6 244 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 IQCGQ9H095 443 aaKnown RBP22.09■■□□□ 1.13
LIMS2-201ENST00000324938 UGT1A7Q9HAW7 530 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 UGT1A10Q9HAW8 530 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 UGT1A8Q9HAW9 530 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 COX16Q9P0S2 106 aa22.09■■□□□ 1.13
LIMS2-201ENST00000324938 NRP1O14786 923 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 DUSP11O75319 330 aaKnown RBP22.08■■□□□ 1.13
LIMS2-201ENST00000324938 RFPL1O75677 317 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 IL1BP01584 269 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 FYNP06241 537 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 KRT16P08779 473 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 DAOAP59103 153 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 NME3Q13232 169 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 NLRP9Q7RTR0 991 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 NTAN1Q96AB6 310 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 TTC17Q96AE7 1141 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 STAMBPL1Q96FJ0 436 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 GAD1Q99259 594 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 NOD2Q9HC29 1040 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 ALG13Q9NP73 1137 aaKnown RBP22.08■■□□□ 1.13
LIMS2-201ENST00000324938 MOCS1Q9NZB8 636 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 TRIM33Q9UPN9 1127 aa22.08■■□□□ 1.13
LIMS2-201ENST00000324938 C9IYK1 514 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 PPP1R12AO14974 1030 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-201ENST00000324938 CREB3O43889 395 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 THP07101 528 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 C6orf222P0C671 652 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-201ENST00000324938 SERPINB4P48594 390 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 SERPINB9P50453 376 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 GJA9P57773 515 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 AP1B1Q10567 949 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 PLEKHG4Q58EX7 1191 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 CDHR3Q6ZTQ4 885 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 RFX8Q6ZV50 586 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 SMOQ99835 787 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 MTG1Q9BT17 334 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-201ENST00000324938 RRAGCQ9HB90 399 aa22.07■■□□□ 1.12
LIMS2-201ENST00000324938 CHST12Q9NRB3 414 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms