RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 DHX15O43143 795 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 STRNO43815 780 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 AHCYL1O43865 530 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 KCNA2P16389 499 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 YWHAZP63104 245 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 CRADDP78560 199 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ADRM1Q16186 407 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ZC3H12AQ5D1E8 599 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 AGAP9Q5VTM2 703 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 NT5DC4Q86YG4 428 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 FBXL18Q96ME1 805 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 GPR88Q9GZN0 384 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 DDHD2O94830 711 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 P2RX7Q99572 595 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ZNF670Q9BS34 389 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 PKD2L2Q9NZM6 624 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 MYH15Q9Y2K3 1946 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 AP1G2O75843 785 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 TPBGLP0DKB5 382 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ABCE1P61221 599 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 KRT72Q14CN4 511 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 KHDC1Q4VXA5 237 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 EEF1DP3Q658K8 133 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 CCDC126Q96EE4 140 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 KRT82Q9NSB4 513 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 UBP1Q9NZI7 540 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 SNX13Q9Y5W8 968 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 PRR5-ARHGAP8B1AHC4 643 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ERVK-10P10266 1014 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 ARHGAP8P85298 464 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
TCOF1-201ENST00000323668 DGKDQ16760 1214 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 THEMIS2Q5TEJ8 643 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 DEFB106AQ8N104 65 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 CDRT15Q96T59 188 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 NMRAL1Q9HBL8 299 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 SNX5Q9Y5X3 404 aa15.13■□□□□ 0.01
TCOF1-201ENST00000323668 OCA2Q04671 838 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CATSPERGQ6ZRH7 1159 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 FRA10AC1Q70Z53 315 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 ZNF516Q92618 1163 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 UBE2OQ9C0C9 1292 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 DHX33Q9H6R0 707 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 IL1RL2Q9HB29 575 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 PCDHGC3Q9UN70 934 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 PCDHA11Q9Y5I1 949 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 PHRF1Q9P1Y6 1649 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CLUHO75153 1309 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SUPT7LO94864 414 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 BPGMP07738 259 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 C6orf222P0C671 652 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SLC18A1P54219 525 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 UBAP2LQ14157 1087 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 ZNF235Q14590 738 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 NCLNQ969V3 563 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SARS2Q9NP81 518 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 GID8Q9NWU2 228 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SNTG2Q9NY99 539 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 FETUBQ9UGM5 382 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 C2orf71A6NGG8 1288 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 H3BRB1 525 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 USP12O75317 370 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 PPARGP37231 505 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 NUP93Q8N1F7 819 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 RNF148Q8N7C7 305 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CXorf38Q8TB03 319 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 WNK4Q96J92 1243 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CNDP1Q96KN2 507 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 TRAPPC9Q96Q05 1148 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 NR1H4Q96RI1 486 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CADM1Q9BY67 442 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 TUT1Q9H6E5 874 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 ERBB2P04626 1255 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 TPH1P17752 444 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 KCNMB4Q86W47 210 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 BANPQ8N9N5 519 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 RBM15BQ8NDT2 890 aaKnown RBP15.12■□□□□ 0.01
TCOF1-201ENST00000323668 AFG1LQ8WV93 481 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 C10orf82Q8WW14 230 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CATSPER2Q96P56 530 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 SPON2Q9BUD6 331 aa15.12■□□□□ 0.01
TCOF1-201ENST00000323668 CICQ96RK0 1608 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-201ENST00000323668 ME2P23368 584 aa15.11■□□□□ 0.01
TCOF1-201ENST00000323668 GEMP55040 296 aa15.11■□□□□ 0.01
TCOF1-201ENST00000323668 ROR2Q01974 943 aaKnown RBP15.11■□□□□ 0.01
TCOF1-201ENST00000323668 SPDYAQ5MJ70 313 aa15.11■□□□□ 0.01
TCOF1-201ENST00000323668 ZFP1Q6P2D0 407 aa15.11■□□□□ 0.01
TCOF1-201ENST00000323668 PDCD6IPQ8WUM4 868 aaKnown RBP15.11■□□□□ 0.01
TCOF1-201ENST00000323668 LRRN4Q8WUT4 740 aa15.11■□□□□ 0.01
TCOF1-201ENST00000323668 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
TCOF1-201ENST00000323668 STN1Q9H668 368 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms