RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CYBAP13498 195 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 MSH2P43246 934 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 CSRP3P50461 194 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 TMEM62Q0P6H9 643 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 DSC3Q14574 896 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 TAF2Q6P1X5 1199 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 SMC6Q96SB8 1091 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 VPS37BQ9H9H4 285 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
NCL-201ENST00000322723 RHBDL2Q9NX52 303 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 TRAFD1O14545 582 aaPredicted RBP12.4□□□□□ -0.42
NCL-201ENST00000322723 OPHN1O60890 802 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 BAG2O95816 211 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 ATXN1P54253 815 aaKnown RBP12.4□□□□□ -0.42
NCL-201ENST00000322723 CDK16Q00536 496 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 GBE1Q04446 702 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 GLRA4Q5JXX5 417 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 STXBP5Q5T5C0 1151 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 TMEM154Q6P9G4 183 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 PRPF39Q86UA1 669 aaKnown RBP12.4□□□□□ -0.42
NCL-201ENST00000322723 MIPOL1Q8TD10 442 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 SLC2A14Q8TDB8 520 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 APOPT1Q96IL0 206 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 SERAC1Q96JX3 654 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 MCMBPQ9BTE3 642 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 FAM49AQ9H0Q0 323 aaPredicted RBP12.4□□□□□ -0.42
NCL-201ENST00000322723 CRTAC1Q9NQ79 661 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 KIAA1671Q9BY89 1806 aa12.4□□□□□ -0.42
NCL-201ENST00000322723 BEST1O76090 585 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 UBOX5O94941 541 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 TGDSO95455 350 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 CYP11A1P05108 521 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 NPR3P17342 541 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 BCAR1P56945 870 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 ELF3P78545 371 aaPredicted RBP12.4□□□□□ -0.43
NCL-201ENST00000322723 USP4Q13107 963 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 KRT81Q14533 505 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 HACE1Q8IYU2 909 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 ISL2Q96A47 359 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 TNIP3Q96KP6 325 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.43
NCL-201ENST00000322723 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.43
NCL-201ENST00000322723 MANSC4A6NHS7 340 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 FAM155AB1AL88 458 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 GOLGA8MH3BSY2 632 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PIK3R2O00459 728 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 CREB3O43889 395 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 NOS2P35228 1153 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 CUL3Q13618 768 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 ZMIZ2Q8NF64 920 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 ZSCAN18Q8TBC5 510 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 MAGEB5Q9BZ81 275 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 ARHGEF4Q9NR80 690 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PCNTO95613 3336 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 I6L893 689 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 KCNN4O15554 427 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 TMED1Q13445 227 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 CCSAPQ6IQ19 270 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PIGZQ86VD9 579 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 RNF169Q8NCN4 708 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 TLE6Q9H808 572 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 CPA4Q9UI42 421 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 C15orf41Q9Y2V0 281 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PCDHA11Q9Y5I1 949 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 RFPL1O75677 317 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PTPN1P18031 435 aaKnown RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 KRT4P19013 534 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 IGFBP6P24592 240 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 RGS2P41220 211 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 SERINC5Q86VE9 423 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
NCL-201ENST00000322723 VPS52Q8N1B4 723 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
NCL-201ENST00000322723 DOCK4Q8N1I0 1966 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 POC1B-GALNT4F8VUJ3 575 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 CACNG3O60359 315 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
NCL-201ENST00000322723 MAGEA12P43365 314 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 PDCD2Q16342 344 aaPredicted RBP12.38□□□□□ -0.43
NCL-201ENST00000322723 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
NCL-201ENST00000322723 FAM171BQ6P995 826 aa12.38□□□□□ -0.43
NCL-201ENST00000322723 RFX8Q6ZV50 586 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms